JiaqiLiZju / NvwaLinks
☆36Updated 3 years ago
Alternatives and similar repositories for Nvwa
Users that are interested in Nvwa are comparing it to the libraries listed below
Sorting:
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆20Updated 5 months ago
- ☆53Updated last year
- ☆22Updated 3 years ago
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data☆45Updated 3 months ago
- Snakemake pipeline for plate scATAC-seq processing☆26Updated 2 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆24Updated last year
- ☆19Updated 2 years ago
- Automatic annotation of single-cell RNA-seq data from the literature☆43Updated 5 months ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- SnapHiC: Single Nucleus Analysis Pipeline for Hi-C Data☆42Updated 2 years ago
- Epimap processing and analysis code repository☆33Updated 3 years ago
- This is the package of Yuanfang's winning algorithm in the ENCODE-DREAM in vivo Transcription Factor Binding Site Prediction Challenge☆20Updated 5 years ago
- ☆12Updated 2 years ago
- splicing and feature maps for RBPs☆25Updated 3 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆24Updated 2 years ago
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆14Updated 9 months ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆56Updated 4 years ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆21Updated 5 years ago
- single-cell clustering based on alternative splicing landscapes☆23Updated last year
- polyApipe☆19Updated 11 months ago
- DeepLoop robustly identifies enhancer-promoter interactions from low-depth and single-cell Hi-C data☆34Updated 9 months ago
- ☆26Updated 9 months ago
- A collection of tools to process single-cell omics datasets.☆51Updated 7 months ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Updated last year
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆62Updated 2 months ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, genome subcompartment☆21Updated last year
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- Repository for Cibersortx☆61Updated 4 years ago