erinhwilson / promoter-id-from-rnaseq
Computational framework to identify promoter sequences from RNA-seq datasets
☆10Updated last year
Related projects ⓘ
Alternatives and complementary repositories for promoter-id-from-rnaseq
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆20Updated last year
- A script to make downloading of SRA/GEO data easier☆30Updated last year
- SingleCell Nanopore sequencing data analysis☆52Updated last month
- RiboPlotR package for Ribo-plot☆13Updated last year
- ☆27Updated 6 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆21Updated last year
- visual analysis of your VCF files☆28Updated last year
- ☆17Updated 6 months ago
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆41Updated last month
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆20Updated 7 months ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆15Updated last year
- ☆14Updated 2 years ago
- iCodon customizes gene expression based on the codon composition☆13Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆22Updated 6 months ago
- New version of JACUSA -> 2.0☆23Updated this week
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆14Updated 4 months ago
- ☆25Updated last year
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 6 months ago
- ☆30Updated 4 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆26Updated last year
- Analysis pipeline for the GUIDE-seq assay.☆23Updated 3 months ago
- off-targeting assessment of Cas9 gRNAs☆12Updated 3 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆38Updated 2 years ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated 3 weeks ago
- A list of alternative splicing analysis resources☆37Updated last week
- A guide to running MaxQuant in Linux☆31Updated 4 years ago
- Time-Course Multi-Omics data integration☆24Updated 7 months ago
- Comprehensive and scalable differential splicing analyses☆13Updated 5 months ago
- ☆6Updated 4 years ago