R front-end for TASSEL 5
☆33May 15, 2026Updated last week
Alternatives and similar repositories for rTASSEL
Users that are interested in rTASSEL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- blupADC:An useful tool for animal and plant breeding☆32Nov 22, 2024Updated last year
- Added functions for Echidna in R☆11Apr 14, 2023Updated 3 years ago
- asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models☆21May 19, 2026Updated last week
- Provide tools for collecting environmental data from GIS-based platforms,enabling environmental characterization studies, providing envir…☆33Mar 27, 2025Updated last year
- Practical Haplotype Graph (PHG) version 2☆31May 14, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tidying and visualizing for animal pedigrees☆20Apr 14, 2026Updated last month
- ☆19Sep 20, 2020Updated 5 years ago
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆30May 18, 2026Updated last week
- ☆23Mar 27, 2026Updated last month
- A deeplearning driving bioinformatic toolkit.☆25Jul 14, 2025Updated 10 months ago
- ☆16Jun 14, 2019Updated 6 years ago
- lme4 for Genomic Selection☆18Jan 26, 2026Updated 3 months ago
- Zhou & Stephens (2014) GEMMA multivariate linear mixed model☆13Oct 24, 2020Updated 5 years ago
- DeepGS is a R package for predicting phenotypes from genotypes using deep learning techniques.☆58Dec 3, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.☆35Jul 9, 2022Updated 3 years ago
- R functions related to pedigrees☆14Sep 29, 2025Updated 7 months ago
- R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)☆112May 5, 2026Updated 3 weeks ago
- R package for fitting high-dimensional multivariate linear mixed effect models☆39Oct 20, 2025Updated 7 months ago
- Genome Association Predict Integrate Tools☆233Updated this week
- A neural network model to predict splice site usage and splicing-altering mutations☆17Jul 24, 2025Updated 10 months ago
- PedigreeSim is software that generates simulated genetic marker data of individuals in pedigreed populations. A population can consist of…☆14Apr 13, 2021Updated 5 years ago
- ☆33Feb 24, 2026Updated 3 months ago
- Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism and whole-genome duplication variation☆192Oct 15, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python API for comprehensive GWAS analysis using GEMMA☆106Sep 6, 2023Updated 2 years ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Jan 20, 2025Updated last year
- Multivariate Gaussian Models for Genomic and Pedigree Data☆14May 23, 2020Updated 6 years ago
- Polyploid micro-haplotype assembly using Markov chain Monte Carlo simulation.☆20Nov 17, 2025Updated 6 months ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆46Sep 13, 2024Updated last year
- Strand and WGD aware syntenic gene identification☆16Oct 16, 2025Updated 7 months ago
- 2024 BreedWheat Genomic Selection pipeline☆15Jan 3, 2024Updated 2 years ago
- R package for binmap☆12Aug 3, 2023Updated 2 years ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆20Mar 31, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Genotyping of copy number sensitive allele-specific haplotypes☆28Updated this week
- Creates an N-chart for comparing assembly lengths, including script for counting assembly lengths from a fasta file☆13Feb 2, 2017Updated 9 years ago
- ☆20Feb 24, 2023Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Apr 17, 2026Updated last month
- Package for multi-environment trial analysis☆39Oct 16, 2024Updated last year
- ☆10Jul 23, 2020Updated 5 years ago
- Explore the Plant Trait Ontology on the Planteome site.☆47Apr 22, 2026Updated last month