Alternatives and similar repositories for rTASSEL

Users that are interested in rTASSEL are comparing it to the libraries listed below

• SFUStatgen / LDheatmap
  ☆18Updated 2 years ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆72Updated 3 months ago
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆28Updated last week
• amkusmec / FarmCPUpp
  Perform GWAS using the FarmCPU model.
  ☆24Updated last year
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆73Updated 6 months ago
• drostlab / orthologr
  Genome wide orthology inference and dNdS estimation
  ☆96Updated 3 months ago
• mighster / BLUPs_Heritability
  ☆16Updated 6 years ago
• GMOD / JBrowseR
  R interface to the JBrowse 2 Linear Genome View.
  ☆39Updated last year
• YuLab-SMU / treedataverse
  Meta package for processing and visualizing tree with data
  ☆29Updated 4 years ago
• hemstrow / snpR
  ☆31Updated last week
• YuLab-SMU / plotting-tree-with-data-using-ggtreeExtra
  ☆26Updated 4 years ago
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆57Updated last year
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆95Updated last month
• bodkan / slendr
  Population genetic simulations in R
  ☆61Updated last week
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆149Updated 2 years ago
• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆18Updated 4 years ago
• cooplab / Popgen_teaching_code
  ☆56Updated 3 years ago
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 3 months ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆26Updated 2 months ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆75Updated 2 years ago
• emmanuelparadis / pegas
  Population and Evolutionary Genetics Analysis System
  ☆29Updated 2 weeks ago
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆31Updated 9 months ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated last year
• GuangchuangYu / plotting_tree_with_data
  Two methods for mapping and visualizing associated data on phylogeny using ggtree
  ☆12Updated 6 years ago
• GuangchuangYu / ggtree-current-protocols
  Using ggtree to Visualize Data on Tree-Like Structure
  ☆25Updated 5 years ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• YuLab-SMU / wget
  download files in R using wget -c
  ☆16Updated 4 months ago
• bcbc-group / CyVerese_SNP_calling_webinar
  ☆10Updated 5 years ago
• jendelman / polyBreedR
  Using genome-wide markers for polyploid breeding
  ☆12Updated this week
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆43Updated 4 months ago