R front-end for TASSEL 5
☆33Mar 17, 2026Updated last week
Alternatives and similar repositories for rTASSEL
Users that are interested in rTASSEL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- blupADC:An useful tool for animal and plant breeding☆31Nov 22, 2024Updated last year
- Added functions for Echidna in R☆11Apr 14, 2023Updated 2 years ago
- asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models☆21Nov 8, 2025Updated 4 months ago
- Provide tools for collecting environmental data from GIS-based platforms,enabling environmental characterization studies, providing envir…☆32Mar 27, 2025Updated 11 months ago
- Practical Haplotype Graph (PHG) version 2☆30Mar 13, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Tidying and visualizing for animal pedigrees☆20Updated this week
- A deeplearning driving bioinformatic toolkit.☆25Jul 14, 2025Updated 8 months ago
- ☆19Sep 20, 2020Updated 5 years ago
- ☆21Sep 6, 2024Updated last year
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆29Mar 7, 2026Updated 2 weeks ago
- ☆16Jun 14, 2019Updated 6 years ago
- Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.☆34Jul 9, 2022Updated 3 years ago
- lme4 for Genomic Selection☆18Jan 26, 2026Updated 2 months ago
- Zhou & Stephens (2014) GEMMA multivariate linear mixed model☆12Oct 24, 2020Updated 5 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- DeepGS is a R package for predicting phenotypes from genotypes using deep learning techniques.☆56Dec 3, 2021Updated 4 years ago
- R functions related to pedigrees☆14Sep 29, 2025Updated 5 months ago
- R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)☆112Oct 21, 2025Updated 5 months ago
- R package for fitting high-dimensional multivariate linear mixed effect models☆38Oct 20, 2025Updated 5 months ago
- Genome Association Predict Integrate Tools☆221Mar 10, 2026Updated 2 weeks ago
- A neural network model to predict splice site usage and splicing-altering mutations☆15Jul 24, 2025Updated 8 months ago
- ☆32Feb 24, 2026Updated last month
- PedigreeSim is software that generates simulated genetic marker data of individuals in pedigreed populations. A population can consist of…☆14Apr 13, 2021Updated 4 years ago
- Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism and whole-genome duplication variation☆189Oct 15, 2025Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Python API for comprehensive GWAS analysis using GEMMA☆103Sep 6, 2023Updated 2 years ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Jan 20, 2025Updated last year
- Multivariate Gaussian Models for Genomic and Pedigree Data☆14May 23, 2020Updated 5 years ago
- 2024 BreedWheat Genomic Selection pipeline☆14Jan 3, 2024Updated 2 years ago
- Polyploid micro-haplotype assembly using Markov chain Monte Carlo simulation.☆20Nov 17, 2025Updated 4 months ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆46Sep 13, 2024Updated last year
- Strand and WGD aware syntenic gene identification☆16Oct 16, 2025Updated 5 months ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆19Jan 9, 2026Updated 2 months ago
- R package for binmap☆12Aug 3, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Genotyping of copy number sensitive allele-specific haplotypes☆27Nov 6, 2025Updated 4 months ago
- Creates an N-chart for comparing assembly lengths, including script for counting assembly lengths from a fasta file☆13Feb 2, 2017Updated 9 years ago
- ☆20Feb 24, 2023Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Mar 16, 2026Updated last week
- Package for multi-environment trial analysis☆37Oct 16, 2024Updated last year
- Explore the Plant Trait Ontology on the Planteome site.☆47Mar 16, 2026Updated last week
- ☆10Jul 23, 2020Updated 5 years ago