Alternatives and similar repositories for File_Conversions:

Users that are interested in File_Conversions are comparing it to the libraries listed below

• hahnlab / CAGEE
  Computational Analysis of Gene Expression Evolution
  ☆38Updated last month
• popgenome / lettuce2020
  Codes for the lettuce resequencing project in 2020
  ☆30Updated 3 years ago
• lauguma / GWideCodeML
  A Python package for testing evolutionary hypotheses in genome-wide approaches.
  ☆31Updated 4 years ago
• xukaili / CandiHap
  A haplotype analysis toolkit for natural variation study.
  ☆30Updated last year
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆35Updated 2 years ago
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆38Updated 3 years ago
• almeidasilvaf / doubletrouble
  An R package to identify and classify duplicated genes from whole-genome protein sequence data
  ☆23Updated last week
• sanger-tol / yahs
  Yet another Hi-C scaffolding tool
  ☆20Updated 4 months ago
• alachins / sweed
  Likelihood-based Selective Sweep Detection
  ☆37Updated last year
• thackl / seq-scripts
  scripts for sequence and feature conversion, annotation, analysis ...
  ☆27Updated this week
• darencard / GenomeAnnotation
  Various scripts that I have created that are useful for genome annotation (repeats & proteins)
  ☆16Updated 3 years ago
• dePamphilis / PlantTribes
  PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics
  ☆35Updated last year
• eswlab / orphan-prediction
  methods for orphan gene prediction paper optimization
  ☆25Updated 3 years ago
• baozg / assembly-annotation-pipeline
  Plant genome assembly and annotation pipeline using snakemake
  ☆42Updated last year
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆35Updated 7 months ago
• yongzhiyang2012 / WGDdetector
  ☆21Updated 5 years ago
• amvarani / Plant_Annotation_TEs
  Methods and recipes for Plant Genome Annotation - Transposable Elements
  ☆19Updated last year
• Iceylee / NGS-Pacbio
  Pipelines and scripts for analysing RNA-seq，genome and other sequecing data.
  ☆9Updated 5 years ago
• dongwei1220 / EasySpeciesTree
  Easily construct the ML species tree with single-copy gene shared by different species.
  ☆25Updated 6 years ago
• josieparis / gatk-snp-calling
  Full GATK SNP calling pipeline
  ☆21Updated last year
• vgteam / giraffe-sv-paper
  ☆42Updated 10 months ago
• Nextomics / pipeline-for-isoseq
  A pipeline for isoseq
  ☆23Updated 6 years ago
• popgenDK / SATC
  Sex assignment through coverage
  ☆17Updated last year
• cfarkas / annotate_my_genomes
  A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes
  ☆30Updated 11 months ago
• wjian8 / psvcp_v1.01
  Pan-genome Construction and Population Structure Variation Calling pipeline
  ☆38Updated 6 months ago
• joepickrell / pophistory-tutorial
  Tutorial on using popular tools for learning about population history
  ☆49Updated 6 years ago
• MorrellLAB / BAD_Mutations
  Deleterious mutation prediction pipeline
  ☆13Updated 3 months ago
• Menggg / BLINK
  BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
  ☆34Updated 3 months ago
• ellenbell / FasTE
  A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…
  ☆27Updated 2 years ago
• evodify / genotype-files-manipulations
  Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.
  ☆10Updated 4 years ago