Alternatives and similar repositories for lme4GS:

Users that are interested in lme4GS are comparing it to the libraries listed below

• MarcooLopez / Genomic-Selection
  ☆24Updated 4 years ago
• cran / sommer
   This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…
  ☆16Updated 3 weeks ago
• covaruber / sommer
  ☆43Updated last week
• whussain2 / Analysis-pipeline
  ☆35Updated 3 years ago
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆24Updated last week
• yzhlinscau / AFEchidna
  Added functions for Echidna in R
  ☆11Updated last year
• filippob / introduction_to_gwas
  https://filippob.github.io/introduction_to_gwas/
  ☆19Updated 8 months ago
• cma2015 / G2P
  G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…
  ☆12Updated 7 years ago
• gdlc / BGLR-R
  ☆106Updated this week
• samuelbfernandes / simplePHENOTYPES
  Simulation of Pleiotropic, Linked and Epistatic Phenotypes
  ☆12Updated last year
• YinLiLin / hibayes
  Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies
  ☆49Updated last year
• amkusmec / FarmCPUpp
  Perform GWAS using the FarmCPU model.
  ☆23Updated 2 months ago
• TXiang-lab / blupADC
  blupADC:An useful tool for animal and plant breeding
  ☆24Updated 3 months ago
• prmunoz / AGHmatrix
  An R package to compute relationship matrices for diploid and autotetraploid species
  ☆18Updated last year
• guilherme-pereira / QTLpoly
  R package for random-effect multiple QTL mapping in autopolyploids
  ☆9Updated 3 years ago
• TiagoOlivoto / metan
  Package for multi-environment trial analysis
  ☆35Updated 4 months ago
• PaulSchmidtGit / Heritability
  Heritability in plant breeding - R and SAS code examples
  ☆33Updated 4 years ago
• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆62Updated 2 years ago
• Rpedigree / pedigreeTools
  R functions related to pedigrees
  ☆11Updated 8 months ago
• jendelman / GWASpoly
  GWAS software that can handle autopolyploids
  ☆28Updated 4 months ago
• bcm-uga / lfmm
  Fitting latent factor mixed models
  ☆12Updated 4 years ago
• Tom-Jenkins / mapmixture
  R package and web app for spatial visualisation of admixture on a projected map
  ☆42Updated 3 weeks ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆147Updated last year
• YinLiLin / KAML
  Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
  ☆42Updated 2 months ago
• vangiangtran / BWGS
  2024 BreedWheat Genomic Selection pipeline
  ☆12Updated last year
• famuvie / breedR
  Statistical methods for forest genetic resources analysts
  ☆33Updated 7 months ago
• mighster / BLUPs_Heritability
  ☆16Updated 5 years ago
• dentearl / structureHarvester
  Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.
  ☆28Updated 2 years ago
• mmollina / MAPpoly
  Genetic maps in autopolyploids
  ☆27Updated 11 months ago
• maize-genetics / rTASSEL
  R front-end for TASSEL
  ☆29Updated this week