Alternatives and similar repositories for lme4GS

Users that are interested in lme4GS are comparing it to the libraries listed below

• gdlc / BGLR-R
  ☆109Updated last week
• MarcooLopez / Genomic-Selection
  ☆26Updated 4 years ago
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆27Updated last month
• cran / sommer
   This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…
  ☆16Updated 2 months ago
• crWerner / fieldsimr
  ☆14Updated 2 months ago
• TXiang-lab / blupADC
  blupADC:An useful tool for animal and plant breeding
  ☆31Updated 10 months ago
• samuelbfernandes / simplePHENOTYPES
  Simulation of Pleiotropic, Linked and Epistatic Phenotypes
  ☆13Updated 3 weeks ago
• amkusmec / FarmCPUpp
  Perform GWAS using the FarmCPU model.
  ☆24Updated 9 months ago
• Rpedigree / pedigreeTools
  R functions related to pedigrees
  ☆14Updated last week
• yzhlinscau / AFEchidna
  Added functions for Echidna in R
  ☆11Updated 2 years ago
• YinLiLin / KAML
  Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
  ☆46Updated 6 months ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆149Updated 2 years ago
• filippob / introduction_to_gwas
  https://filippob.github.io/introduction_to_gwas/
  ☆21Updated 3 months ago
• whussain2 / Analysis-pipeline
  ☆35Updated 3 years ago
• YinLiLin / hibayes
  Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies
  ☆54Updated last month
• Tom-Jenkins / mapmixture
  R package and web app for spatial visualisation of admixture on a projected map
  ☆44Updated 6 months ago
• arthurkorte / MTMM
  ☆11Updated 6 years ago
• cooplab / Popgen_teaching_code
  ☆56Updated 3 years ago
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆29Updated 6 years ago
• vangiangtran / BWGS
  2024 BreedWheat Genomic Selection pipeline
  ☆13Updated last year
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆32Updated 7 months ago
• jendelman / polyBreedR
  Using genome-wide markers for polyploid breeding
  ☆11Updated last month
• rramadeu / AGHmatrix
  An R package to compute relationship matrices for diploid and autopolyploid species
  ☆11Updated last month
• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆65Updated 2 years ago
• YuLab-SMU / plotting-tree-with-data-using-ggtreeExtra
  ☆26Updated 4 years ago
• YaoLab-Bioinfo / MaizeSNPDB
  A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines
  ☆14Updated 3 years ago
• maize-genetics / rTASSEL
  R front-end for TASSEL 5
  ☆31Updated 5 months ago
• cma2015 / G2P
  G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…
  ☆14Updated 8 years ago
• PaulSchmidtGit / Heritability
  Heritability in plant breeding - R and SAS code examples
  ☆37Updated 4 years ago
• masuday / Blupf90TutorialStandard
  A tutorial of the BLUPF90 family programs
  ☆24Updated 5 months ago