azodichr / GenomicPrediction_2018Links
Influence of algorithms, parameter choice, and feature selection on genomic prediction accuracy
☆11Updated 7 years ago
Alternatives and similar repositories for GenomicPrediction_2018
Users that are interested in GenomicPrediction_2018 are comparing it to the libraries listed below
Sorting:
- scripts for the project of seven thaliana genomes assembly☆40Updated 4 years ago
- ☆42Updated last year
- Scripts and procedures for detecting positively selected genes and codons in primates☆21Updated 4 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆29Updated 7 months ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 4 years ago
- Hapmap-v1☆12Updated 5 years ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- ☆24Updated 8 years ago
- info and docs for the Wright Lab☆15Updated 9 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆55Updated 2 months ago
- Genome annotation pipeline☆59Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆42Updated 10 months ago
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆48Updated 3 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- Useful bioinformatic scripts☆57Updated 8 months ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆43Updated 2 months ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- Tutorial about R package PopGenome☆43Updated 6 years ago
- This is a read-only mirror of the CRAN R package repository. rrBLUP — Ridge Regression and Other Kernels for Genomic Selection. Homepag…☆14Updated last year
- MITE Tracker: An accurate approach to identify miniature inverted-repeat transposable elements in large genomes☆20Updated last year
- Automated pipeline for running CoalHMM☆13Updated last year
- Codes for the lettuce resequencing project in 2020☆31Updated 4 years ago
- Scripts of population genomics analysis☆36Updated 7 years ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆67Updated 4 years ago
- Tutorial on using popular tools for learning about population history☆51Updated 7 years ago
- ☆21Updated 2 years ago
- ☆40Updated 2 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆56Updated last year