Influence of algorithms, parameter choice, and feature selection on genomic prediction accuracy
☆12Apr 2, 2018Updated 8 years ago
Alternatives and similar repositories for GenomicPrediction_2018
Users that are interested in GenomicPrediction_2018 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Sep 20, 2020Updated 5 years ago
- ☆29Nov 22, 2020Updated 5 years ago
- G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…☆18Sep 27, 2017Updated 8 years ago
- easyPheno: a model agnostic phenotype prediction framework☆14Nov 24, 2025Updated 4 months ago
- Scripts to convert between file formats for various analyses☆16May 10, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Nov 24, 2020Updated 5 years ago
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆15Jun 24, 2025Updated 9 months ago
- Can deep learning improve genomic prediction of complex human traits? by Pau Bellot, Gustavo de los Campos, Miguel Pérez-Enciso, Genetics☆23Aug 2, 2024Updated last year
- Genomic Selection using Neural Networks implemented in TensorFlow☆10Aug 22, 2018Updated 7 years ago
- iPat allows you to perform GWAS and GS with drags and clicks!☆11Jul 12, 2022Updated 3 years ago
- ☆36Jan 22, 2022Updated 4 years ago
- DeepWAS: Directly integrating regulatory information into GWAS using machine learning☆17Mar 14, 2019Updated 7 years ago
- Plant breeding simulations with AlphaSimR☆27Jan 5, 2025Updated last year
- lme4 for Genomic Selection☆18Jan 26, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- RelocaTE2☆18Oct 6, 2023Updated 2 years ago
- Python language bindings for bwa☆12Mar 27, 2026Updated 2 weeks ago
- ☆11Jan 31, 2018Updated 8 years ago
- A repo with just adapter sequences☆15Jul 7, 2025Updated 9 months ago
- DeepREAL: A Deep Learning Powered Multi-scale Modeling Framework Towards Predicting Out-of-distribution Receptor Activity of Ligand Bindi…☆11Apr 23, 2022Updated 3 years ago
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Aug 1, 2013Updated 12 years ago
- The Genome Analysis Tutorial Page.☆13Oct 5, 2019Updated 6 years ago
- A python tool to evaluate genomic prediction in complex scenarios☆37Oct 18, 2022Updated 3 years ago
- ☆12Oct 13, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- TrGP aims to get knowledge from the source task's learning system to improve the target genomic prediction (GP) task.☆15Dec 12, 2023Updated 2 years ago
- A tool to plot significant regions of GWAS☆29Jan 27, 2023Updated 3 years ago
- Deep Learning tool trained on protein sequence embeddings from protein language models to accurately detect remote homologues for CATH su…☆14Jun 22, 2022Updated 3 years ago
- Pipeline for universal design of target-enrichment probes from various sources of genomic data.☆29Oct 18, 2020Updated 5 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆33Apr 1, 2026Updated 2 weeks ago
- Genome Analysis Pipeline for Lecture☆20May 12, 2021Updated 4 years ago
- Automatically exported from code.google.com/p/malder☆11Mar 17, 2015Updated 11 years ago
- A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines☆14Oct 10, 2022Updated 3 years ago
- Plotting experimental designs for field experiments☆22Dec 5, 2025Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An open-source GUI for reconstructing plant 3D architecture from laser scans.☆29Apr 8, 2026Updated last week
- ☆114Oct 3, 2025Updated 6 months ago
- A tool to implement Genomic Prediction Experiments using Deep Learning☆17Mar 24, 2023Updated 3 years ago
- A Semi-Automated Machine Learning Pipeline. Developed by the Shiu Lab. Implemented using SciKit-Learn☆28May 7, 2024Updated last year
- Underlying code for the online stats training website.☆23Aug 4, 2022Updated 3 years ago
- Biostatistics with Python, published by Packt☆27Mar 2, 2026Updated last month
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆27May 12, 2020Updated 5 years ago