YaoLab-Bioinfo / MaizeSNPDBLinks
A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines
☆14Updated 2 years ago
Alternatives and similar repositories for MaizeSNPDB
Users that are interested in MaizeSNPDB are comparing it to the libraries listed below
Sorting:
- Two methods for mapping and visualizing associated data on phylogeny using ggtree☆12Updated 6 years ago
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆13Updated 5 months ago
- ☆17Updated 4 years ago
- Perform GWAS using the FarmCPU model.☆23Updated 8 months ago
- blupADC:An useful tool for animal and plant breeding☆29Updated 9 months ago
- Codes for the lettuce resequencing project in 2020☆31Updated 4 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 3 months ago
- Efficient compression and retrieve of genotype data with integer sparse matrices☆16Updated 4 months ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Updated 6 months ago
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆27Updated last week
- ☆30Updated this week
- ☆25Updated 4 years ago
- Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction☆44Updated 4 months ago
- Using genome-wide markers for polyploid breeding☆11Updated 2 weeks ago
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Updated 3 years ago
- Plant small RNA target prediction tool☆26Updated 8 years ago
- QTL mapping with binmap data☆18Updated 6 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 5 months ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- ☆63Updated 4 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Perform GWAS with gemma in a simple pipeline☆26Updated 4 months ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆29Updated 6 years ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆19Updated 3 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- ☆11Updated 3 years ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- R package for binmap☆13Updated 2 years ago
- Genome wide orthology inference and dNdS estimation☆95Updated last year
- A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.☆19Updated 10 months ago