green-striped-gecko / dartRView external linksLinks
Importing and Analysing DArT type snp and silicodart data
☆36Mar 27, 2025Updated 10 months ago
Alternatives and similar repositories for dartR
Users that are interested in dartR are comparing it to the libraries listed below
Sorting:
- method for modeling continuous and discrete population genetic structure☆38Jan 8, 2024Updated 2 years ago
- ☆10Feb 21, 2020Updated 5 years ago
- ☆12Mar 11, 2025Updated 11 months ago
- Phylogenetics for the Environmental Sciences☆15Jun 18, 2019Updated 6 years ago
- HybridCheck, an R package for quickly scripting scans of sequence data for recombination regions.☆15Jan 28, 2022Updated 4 years ago
- This is a pipeline describing how I assembled the complete genome of the freshwater angelfish, Pterophylllum scalare.☆14Oct 21, 2022Updated 3 years ago
- Process MS results in R, in a tidy way☆16May 25, 2018Updated 7 years ago
- An R package to help in plotting PCA results nicely.☆12Jan 16, 2020Updated 6 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆17Feb 19, 2022Updated 3 years ago
- Mitohelper: a mitochondrial reference sequence analysis tool for fish eDNA studies☆21Nov 14, 2025Updated 3 months ago
- ☆17Sep 20, 2020Updated 5 years ago
- Guide to transcriptome assembly & analysis☆21Apr 12, 2017Updated 8 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Jul 4, 2018Updated 7 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Jun 6, 2019Updated 6 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆44Jul 25, 2025Updated 6 months ago
- ☆19Jan 24, 2018Updated 8 years ago
- Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool☆20Apr 17, 2019Updated 6 years ago
- Hitting associations with k-mers☆44May 14, 2022Updated 3 years ago
- Infer demographic history with the Moran model☆51Jun 14, 2025Updated 8 months ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- deep learning prediction of geographic location from individual genome sequences☆52Jan 20, 2025Updated last year
- kuenm: An R package for detailed calibration and construction of Maxent Ecological Niche Models.☆68Dec 4, 2023Updated 2 years ago
- Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]☆19Aug 6, 2023Updated 2 years ago
- Scripts to handle NGS data and other biological data☆22Jan 24, 2024Updated 2 years ago
- De novo estimates of genetic relatedness from next-gen sequencing data☆45Jul 28, 2019Updated 6 years ago
- RADseq Data Exploration, Manipulation and Visualization using R☆59Sep 4, 2025Updated 5 months ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Nov 17, 2021Updated 4 years ago
- software for the MAPS method☆25Mar 20, 2019Updated 6 years ago
- Perform GWAS using the FarmCPU model.☆24Dec 14, 2024Updated last year
- An integrated high performance bioinformatics toolkit☆23Apr 24, 2019Updated 6 years ago
- R package for pedigree inference based on SNP data☆28Jan 4, 2026Updated last month
- Quantitative Trait Cluster Association Test in R☆26Apr 19, 2021Updated 4 years ago
- Module for analysing admixture graphs☆29Apr 30, 2018Updated 7 years ago
- redlistr: Tools for the IUCN Red List of Ecosystems and Species☆36Feb 5, 2026Updated last week
- detection of duplications and deletions using Python based machine learning techniques☆28Jul 22, 2019Updated 6 years ago
- An Interactive Anatomography Widget for Shiny☆13Jan 8, 2025Updated last year
- PartitionFinder discovers optimal partitioning schemes for DNA sequences.☆71Mar 10, 2021Updated 4 years ago
- Easy to define segments in y-axis for 'ggplot2'.☆27Oct 6, 2019Updated 6 years ago
- Machuruku☆32Jan 20, 2025Updated last year