1001genomes / AraGWASView external linksLinks
GWAS catalogue for Arabidopsis thaliana
☆11Feb 29, 2024Updated last year
Alternatives and similar repositories for AraGWAS
Users that are interested in AraGWAS are comparing it to the libraries listed below
Sorting:
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13May 11, 2024Updated last year
- Computational Framework for Genome-Wide Association Studies and Meta-Studies in C/C++ with Python Interfaces☆11Oct 31, 2020Updated 5 years ago
- ☆17Nov 26, 2023Updated 2 years ago
- ☆17Sep 20, 2020Updated 5 years ago
- This tool performs an automatic identification, annotation, and analysis of the MYB gene family in plants. It can be applied to new trans…☆20Oct 12, 2025Updated 4 months ago
- Scripts and resources for the haploblocks manuscript☆18Mar 20, 2020Updated 5 years ago
- A box of genomics tools☆21Aug 26, 2020Updated 5 years ago
- A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.☆19Oct 28, 2024Updated last year
- SINE annotation tool for plant genomes☆18Jan 21, 2024Updated 2 years ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- Practical Haplotype Graph (PHG) version 2☆30Updated this week
- ☆29Apr 16, 2023Updated 2 years ago
- ☆16Aug 17, 2023Updated 2 years ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Oct 26, 2018Updated 7 years ago
- HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high…☆10Apr 15, 2025Updated 10 months ago
- a pipeline to process data of PEM-seq or data similar, which is more comprehensive than superQ☆10Jan 7, 2026Updated last month
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Jul 22, 2019Updated 6 years ago
- Probabilistic Inference of Molecular Evolution☆10Sep 6, 2021Updated 4 years ago
- The Dockerfiles for breeDBase☆12Updated this week
- genome basic statistics tool (e.g. n50, n10, ng50,...)☆15Mar 5, 2012Updated 13 years ago
- RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)☆10Jun 28, 2018Updated 7 years ago
- ☆10Jun 13, 2020Updated 5 years ago
- ☆13Nov 13, 2023Updated 2 years ago
- R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecula…☆11Jan 29, 2026Updated 2 weeks ago
- Information for the Intro to Cluster System Administration for Non-Sysadmins class☆10Dec 12, 2021Updated 4 years ago
- A R package for Participatory Plant Breeding statisticial analyses☆10Apr 30, 2021Updated 4 years ago
- luigi based workflow for analysising WGS samples collecting from different source. It will auto clustering, annotating gene or species, a…☆10Nov 28, 2023Updated 2 years ago
- Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis☆40May 17, 2021Updated 4 years ago
- ☆12Dec 15, 2020Updated 5 years ago
- Bioinformatics scripts☆14Dec 23, 2024Updated last year
- ☆10Sep 4, 2024Updated last year
- Materials for R/Tidyverse tutorials☆13Jan 4, 2023Updated 3 years ago
- ☆14Jan 21, 2021Updated 5 years ago
- Galaxy Wrappers and helpers for the MISA ttols☆11Oct 11, 2014Updated 11 years ago
- Notebooks for CPA figures☆14Dec 9, 2022Updated 3 years ago
- centos7(mini)通过kubeadm安装kubenetes集群☆12Apr 2, 2019Updated 6 years ago
- The Dinucleotide Quantification Python Package☆11Mar 12, 2022Updated 3 years ago
- The EM Algorithm for Gaussian Mixtures （高斯混合模型的EM算法实现）☆12Dec 30, 2018Updated 7 years ago
- 中国作物种质信息网☆10Apr 1, 2017Updated 8 years ago