amkusmec / FarmCPUppLinks
Perform GWAS using the FarmCPU model.
☆24Updated 11 months ago
Alternatives and similar repositories for FarmCPUpp
Users that are interested in FarmCPUpp are comparing it to the libraries listed below
Sorting:
- ☆17Updated 5 years ago
- https://filippob.github.io/introduction_to_gwas/☆21Updated 4 months ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆19Updated 3 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 7 months ago
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆54Updated 2 months ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 6 months ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆64Updated last week
- Generalized linear Mixed Model Association Tests☆44Updated 2 years ago
- ☆31Updated 2 months ago
- ☆11Updated 3 years ago
- Integrative analysis of structural variations.☆40Updated last year
- ☆26Updated 4 years ago
- Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)☆24Updated last month
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Module for analysing admixture graphs☆29Updated 7 years ago
- Bayesian hierarchical model for complex trait analysis☆46Updated last year
- Fitting latent factor mixed models☆13Updated 5 years ago
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆14Updated 8 months ago
- Handy genetics-related R scripts☆32Updated 5 years ago
- Evolutionary Transcriptomics with R☆49Updated this week
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 3 years ago
- ☆18Updated last year
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Updated 4 years ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- A set of R functions that help faciliate a lot of tedious processing☆18Updated 7 years ago
- QTL mapping with binmap data☆18Updated 6 years ago
- ☆44Updated 8 months ago
- Mixed Model Package For Genome-wide association mapping.☆17Updated 6 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 6 years ago