Alternatives and similar repositories for BWGS

Users that are interested in BWGS are comparing it to the libraries listed below

• yzhlinscau / AFEchidna
  Added functions for Echidna in R
  ☆11Updated 2 years ago
• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆18Updated 4 years ago
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆27Updated 4 months ago
• YaoLab-Bioinfo / MaizeSNPDB
  A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines
  ☆13Updated 2 years ago
• TXiang-lab / blupADC
  blupADC:An useful tool for animal and plant breeding
  ☆27Updated 7 months ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆150Updated last year
• gdlc / BGLR-R
  ☆108Updated last week
• grunwaldlab / Population_Genetics_in_R
  A primer for computational tools to analyze genetics of populations in R
  ☆87Updated 4 years ago
• YinLiLin / KAML
  Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
  ☆43Updated 3 months ago
• whussain2 / Analysis-pipeline
  ☆35Updated 3 years ago
• GuangchuangYu / plotting_tree_with_data
  Two methods for mapping and visualizing associated data on phylogeny using ggtree
  ☆12Updated 6 years ago
• MarcooLopez / Genomic-Selection
  ☆25Updated 4 years ago
• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆65Updated 2 years ago
• mighster / BLUPs_Heritability
  ☆16Updated 6 years ago
• jendelman / polyBreedR
  Using genome-wide markers for polyploid breeding
  ☆11Updated 6 months ago
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆31Updated 4 months ago
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆29Updated 6 years ago
• YTLogos / BnaSNPDB
  An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions
  ☆13Updated 4 months ago
• dipetkov / eems
  Estimating Effective Migration Surfaces
  ☆103Updated last year
• Tom-Jenkins / mapmixture
  R package and web app for spatial visualisation of admixture on a projected map
  ☆44Updated 3 months ago
• amkusmec / FarmCPUpp
  Perform GWAS using the FarmCPU model.
  ☆23Updated 7 months ago
• samuelbfernandes / simplePHENOTYPES
  Simulation of Pleiotropic, Linked and Epistatic Phenotypes
  ☆13Updated last year
• famuvie / breedR
  Statistical methods for forest genetic resources analysts
  ☆35Updated 11 months ago
• JaeYoonKim72 / GMStool
  ☆16Updated 4 years ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated 3 weeks ago
• guilherme-pereira / QTLpoly
  R package for random-effect multiple QTL mapping in autopolyploids
  ☆9Updated 3 years ago
• jingwanglab / Populus_genomic_prediction_climate_vulnerability
  ☆41Updated 2 years ago
• Rpedigree / pedigreeTools
  R functions related to pedigrees
  ☆12Updated last year
• luansheng / visPedigree
  Tidying and visualization for animal pedigree
  ☆18Updated 2 years ago
• cma2015 / G2P
  G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…
  ☆13Updated 7 years ago