Alternatives and similar repositories for BWGS

Users that are interested in BWGS are comparing it to the libraries listed below

• yzhlinscau / AFEchidna
  Added functions for Echidna in R
  ☆11Updated 2 years ago
• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆18Updated 4 years ago
• MarcooLopez / Genomic-Selection
  ☆25Updated 4 years ago
• cma2015 / G2P
  G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…
  ☆13Updated 7 years ago
• guilherme-pereira / QTLpoly
  R package for random-effect multiple QTL mapping in autopolyploids
  ☆9Updated 3 years ago
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆27Updated 4 months ago
• TXiang-lab / blupADC
  blupADC:An useful tool for animal and plant breeding
  ☆27Updated 7 months ago
• jendelman / polyBreedR
  Using genome-wide markers for polyploid breeding
  ☆11Updated 5 months ago
• whussain2 / Analysis-pipeline
  ☆35Updated 3 years ago
• Capblancq / RDA-landscape-genomics
  ☆31Updated 3 years ago
• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆65Updated 2 years ago
• mighster / BLUPs_Heritability
  ☆16Updated 6 years ago
• mmollina / MAPpoly
  Genetic maps in autopolyploids
  ☆29Updated last month
• YaoLab-Bioinfo / MaizeSNPDB
  A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines
  ☆13Updated 2 years ago
• TCLamnidis / AdmixturePlotter
  An R script to generate plots for ADMIXTURE runs, for multiple K values.
  ☆19Updated 4 months ago
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆31Updated 3 months ago
• filippob / introduction_to_gwas
  https://filippob.github.io/introduction_to_gwas/
  ☆20Updated this week
• jendelman / diaQTL
  QTL analysis in diallel populations
  ☆12Updated last year
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆29Updated 6 years ago
• jendelman / GWASpoly
  GWAS software that can handle autopolyploids
  ☆28Updated 8 months ago
• GuangchuangYu / plotting_tree_with_data
  Two methods for mapping and visualizing associated data on phylogeny using ggtree
  ☆12Updated 6 years ago
• speciationgenomics / speciationgenomics.github.io
  Repository for speciation genomics website
  ☆25Updated 11 months ago
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆38Updated last year
• bodkan / demografr
  Fast and simple simulation-based population genetic inference in R
  ☆27Updated 2 weeks ago
• hemstrow / snpR
  ☆30Updated 3 weeks ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated last year
• cran / rrBLUP
   This is a read-only mirror of the CRAN R package repository. rrBLUP — Ridge Regression and Other Kernels for Genomic Selection. Homepag…
  ☆14Updated last year
• rojaff / LanGen_pipeline
  Suit of R-scripts to perform landscape genomic analyses
  ☆14Updated 5 years ago
• nicocriscuolo / StructuRly
  Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis
  ☆22Updated 7 months ago
• jasonleebrown / UCE_phyluce_pipeline
  UCE Bioinformatics Pipeline
  ☆16Updated 7 months ago