PiRATE (Pipeline to Retrieve and Annotate Transposable Elements)
☆21Nov 10, 2024Updated last year
Alternatives and similar repositories for PiRATE
Users that are interested in PiRATE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Jan 29, 2020Updated 6 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Mar 29, 2023Updated 3 years ago
- Transposable Elements MOvement detection using LOng reads☆25Sep 11, 2026Updated last week
- A tool to construct repeats directly from raw reads☆17May 29, 2021Updated 5 years ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆37Apr 17, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆28Dec 7, 2022Updated 3 years ago
- Repetitive motif detection by Assembly of Repetitive K-mers. RepARK is free for academic and non-profit use. By downloading you agree wit…☆16Sep 16, 2024Updated 2 years ago
- Invertory of TE-gene isoforms☆14Sep 18, 2023Updated 3 years ago
- MineYourSymbiont : Targetted genome assembly for metagenomics pipeline.