Analysis of transposable elements
☆13Apr 27, 2026Updated last month
Alternatives and similar repositories for atena
Users that are interested in atena are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jan 29, 2020Updated 6 years ago
- read and analyse RepeatMasker output☆27May 22, 2023Updated 3 years ago
- Distribution of TEs and their relationship to genes in host genome☆24Jun 20, 2023Updated 2 years ago
- R package for annotating metagenomic datasets with taxonomic information☆10Feb 11, 2020Updated 6 years ago
- profile the repeat landscape in a genome☆16Sep 9, 2014Updated 11 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Homepage for YuLab-SMU☆14May 2, 2026Updated 3 weeks ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Sep 23, 2020Updated 5 years ago
- ☆23Jun 5, 2021Updated 4 years ago
- Repositorio de apuntes y código del curso Introducción a la bioinformática e investigación reproducible para análisis genéticos del semes…☆12Jun 1, 2017Updated 8 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆26Aug 20, 2020Updated 5 years ago
- A wrapper of the React library 'Chakra UI' for usage in Shiny.☆23Jan 5, 2022Updated 4 years ago
- 🔬 MCP server for AI-powered napari control. Connect Claude, ChatGPT, Cursor, and other LLMs to napari for interactive image analysis. Pe…☆34Mar 25, 2026Updated 2 months ago
- A public list of computational methods for cell type inference from genome-scale DNA methylation data☆13Mar 26, 2019Updated 7 years ago
- Transposable Elements MOvement detection using LOng reads☆25Mar 31, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Snakemake pipeline to analyze transposable element 'omics data.☆32Apr 11, 2026Updated last month
- ☆11Aug 21, 2024Updated last year
- TEspeX - pipeline for Transposable Elements expression quantification☆22Aug 24, 2023Updated 2 years ago
- ☆12Mar 18, 2024Updated 2 years ago
- ☆36Mar 5, 2026Updated 2 months ago
- Helper functions for working with inForm data.☆23May 3, 2022Updated 4 years ago
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 3 years ago
- ☆26Oct 5, 2021Updated 4 years ago
- PiRATE (Pipeline to Retrieve and Annotate Transposable Elements)☆19Nov 10, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- scripts used to download and analyze insect assemblies from GenBank☆15Feb 16, 2021Updated 5 years ago
- This is a read-only mirror of the CRAN R package repository. FactoMineR — Multivariate Exploratory Data Analysis and Data Mining. Homep…☆16Apr 8, 2026Updated last month
- A Nextflow pipeline for running synteny analysis.☆16Apr 24, 2026Updated last month
- Omics Data Analysis Tools☆14Nov 26, 2024Updated last year
- Introduction to Python3☆11Oct 26, 2020Updated 5 years ago
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆30May 5, 2023Updated 3 years ago
- Workshop: RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR☆13Aug 23, 2021Updated 4 years ago
- Software for detecting transposable element insertions from next-generation sequencing data☆11Feb 24, 2023Updated 3 years ago
- MCHelper: An automatic tool to curate transposable element libraries☆46May 6, 2026Updated 3 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- The blog of tidyomics☆13Jul 12, 2025Updated 10 months ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Jul 27, 2023Updated 2 years ago
- A ggplot interface for creating clincial trial swimlanes☆16Aug 2, 2022Updated 3 years ago
- BioC2020: Where Software and Biology Connect☆12Mar 15, 2023Updated 3 years ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆11May 12, 2025Updated last year
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Oct 30, 2024Updated last year
- Nextflow workflow for automatic repeat detection, classification and masking☆13Feb 19, 2018Updated 8 years ago