R package providing query functionality to BioMart instances like Ensembl
☆51Sep 21, 2026Updated this week
Alternatives and similar repositories for biomaRt
Users that are interested in biomaRt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A package to count reads mapping on transposable elements subfamilies, families and classes.☆12Feb 3, 2023Updated 3 years ago
- iCount, protein-RNA interaction analytics☆25Dec 14, 2021Updated 4 years ago
- Genomic Data Retrieval with R☆226Dec 2, 2025Updated 9 months ago
- This fork of Illumina/ExpansionHunter introduces new features and optimizations☆17Updated this week
- Parse samtools pileup file to get how many bases and what kind of bases are called☆14Apr 30, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Read HOMER motif analysis output in R.☆18Mar 1, 2018Updated 8 years ago
- Code to generate Figure 2 of the paper "Predicting age from the transcriptome of human dermal fibroblasts" from the FPKM tables☆25Jul 9, 2021Updated 5 years ago
- ☆21Apr 23, 2024Updated 2 years ago
- Website Deployment for CRC User Manual☆13Updated this week
- General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction; Evaluation of Failure-Time Surrogate Endpoints. The R pa…☆11May 6, 2024Updated 2 years ago
- EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery☆23Oct 3, 2024Updated last year
- ☆13Nov 19, 2023Updated 2 years ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆42Nov 18, 2025Updated 10 months ago
- One hour lecture to introduce LaTeX to maths undergraduates.☆10Oct 2, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Apr 17, 2024Updated 2 years ago
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆12Feb 25, 2026Updated 7 months ago
- ☆23Sep 20, 2022Updated 4 years ago
- CRAN Package For Managing Bioconductor Packages☆76Jul 30, 2026Updated last month
- A Nextflow pipeline for running synteny analysis.☆20Aug 2, 2026Updated last month
- Implements the algorithm form "Sparse logistic principal components analysis for binary data"☆14Dec 11, 2013Updated 12 years ago
- Differential analysis for ChIP-seq with biological replicates☆35Jan 5, 2022Updated 4 years ago
- DYNamics Agnostic Network MOdels☆18Jul 3, 2018Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Survival analysis in MATLAB☆21Aug 4, 2025Updated last year
- Bayesian mixed-effect model to test differences in cell type proportions from single-cell data, in R☆134Sep 18, 2026Updated last week
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- ☆17Mar 11, 2023Updated 3 years ago
- ☆16Updated this week
- ☆16Sep 1, 2023Updated 3 years ago
- Regularization Paths for Huber Loss Regression and Quantile Regression Penalized by Lasso or Elastic-Net☆10Nov 9, 2024Updated last year
- R-package: Bayesian variable selection, model choice, and regularized estimation for (spatial) generalized additive mixed regression …☆14Oct 22, 2024Updated last year
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Jul 6, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Nonparametric kernel density estimation, bandwidth selection, and other utilities for analyzing directional data☆13Aug 7, 2026Updated last month
- genome annotation (RNAseq and TE) pipeline (draft)☆13Sep 17, 2026Updated last week
- Nextflow version of Sopa - spatial omics pipeline and analysis☆20Sep 16, 2026Updated last week
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Dec 5, 2023Updated 2 years ago
- R Package. Bayesian and nonparametric quantile regression, using Gaussian Processes to model the trend, and Dirichlet Processes, for the …☆11Nov 22, 2019Updated 6 years ago
- DNA methylation studies of mammalian species☆46Jan 21, 2026Updated 8 months ago
- Invariant Representation learning☆20Jun 26, 2024Updated 2 years ago