ropensci / biomartr

Related projects ⓘ

Alternatives and complementary repositories for biomartr

• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆187Updated 8 months ago
• mhahsler / rBLAST
  Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
  ☆105Updated 6 months ago
• knausb / vcfR
  Tools to work with variant call format files
  ☆246Updated 3 weeks ago
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆165Updated 3 weeks ago
• bernatgel / karyoploteR
  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
  ☆298Updated 9 months ago
• raivokolde / pheatmap
  Pretty heatmaps
  ☆236Updated last year
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆140Updated 6 months ago
• KlausVigo / phangorn
  Phylogenetic analysis in R
  ☆203Updated this week
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆167Updated last month
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆207Updated 3 weeks ago
• egeulgen / pathfindR
  pathfindR: Enrichment Analysis Utilizing Active Subnetworks
  ☆183Updated 3 weeks ago
• griffithlab / GenVisR
  Genome data visualizations
  ☆210Updated 5 months ago
• YuLab-SMU / enrichplot
  Visualization of Functional Enrichment Result
  ☆232Updated this week
• yiluheihei / microbiomeMarker
  R package for microbiome biomarker discovery
  ☆171Updated last year
• microbiome / microbiome
  microbiome R package
  ☆289Updated last year
• mikelove / bioc-refcard
  Bioconductor cheat sheet
  ☆187Updated 2 months ago
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆227Updated 5 months ago
• mixOmicsTeam / mixOmics
  Development repository for the Bioconductor package 'mixOmics '
  ☆161Updated this week
• YuLab-SMU / ChIPseeker
  ChIP peak Annotation, Comparison and Visualization
  ☆224Updated last week
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆117Updated 4 years ago
• kevinblighe / EnhancedVolcano
  Publication-ready volcano plots with enhanced colouring and labeling
  ☆412Updated 4 months ago
• stemangiola / tidyseurat
  Seurat meets tidyverse. The best of both worlds.
  ☆157Updated 3 months ago
• kasperdanielhansen / genbioconductor
  Materials for Genomics Data Science: Introduction to Bioconductor
  ☆91Updated 3 months ago
• wilkox / gggenes
  ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2
  ☆498Updated 8 months ago
• YaoLab-Bioinfo / shinyCircos
  an R/shiny application for creation of Circos plot interactively
  ☆154Updated 2 years ago
• Bioconductor / Contributions
  Contribute Packages to Bioconductor
  ☆135Updated last year
• XiaoLuo-boy / ggheatmap
  ggplot2 version of heatmap
  ☆84Updated last year
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆161Updated last year
• stefpeschel / NetCoMi
  Network construction, analysis, and comparison for microbial compositional data
  ☆154Updated this week
• jbisanz / qiime2R
  Import qiime2 artifacts to R
  ☆156Updated 3 months ago