zhangyuqing / sva-devel
☆12Updated 4 years ago
Alternatives and similar repositories for sva-devel:
Users that are interested in sva-devel are comparing it to the libraries listed below
- Code associated with MIX-seq manuscript☆15Updated 4 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 3 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- single cell Gene co-Expression Network Analysis☆9Updated 2 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated last year
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- a tool for summarizing and integrating gene-set analysis results☆16Updated 8 months ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆20Updated last year
- ☆28Updated 6 years ago
- ☆40Updated 7 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆31Updated 2 weeks ago
- XEnograft Visualization & Analysis☆11Updated last month
- Dichotomous of innate immune landscape☆17Updated 5 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆22Updated 2 months ago
- Scripts to install as a Bioconda package for making workflows☆18Updated 7 months ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Updated 2 years ago
- ☆38Updated 2 years ago
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- ☆12Updated 11 months ago
- Z Hu et al. The repertoire of serous ovarian cancer non-genetic heterogeneity revealed by single-cell sequencing of normal fallopian tube…☆13Updated 4 years ago
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- A Shiny tool to define the cell-type of action by integrating single cell expression data with GWAS☆12Updated 6 years ago
- ☆53Updated 2 months ago