EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery
☆23Oct 3, 2024Updated last year
Alternatives and similar repositories for EmbedGEM
Users that are interested in EmbedGEM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatio…☆14Oct 22, 2025Updated 5 months ago
- insitro's repository for public research code and data☆24Dec 1, 2025Updated 4 months ago
- Channel Vision Transformers: An Image Is Worth C x 16 x 16 Words☆71Feb 22, 2024Updated 2 years ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- Meta-analysis of drug target evidence in single-cell data☆16Oct 22, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This repository contain a dataset describing the urgency of admission among COVID-19 patients, intended for use in a predictive modeling …☆10Mar 16, 2020Updated 6 years ago
- Code to run the scHLApers pipeline for personalized single-cell HLA quantification☆17Jan 10, 2024Updated 2 years ago
- An image segmentation project using PyTorch to segment the Left Atrium in 3D Late gadolinium enhanced - cardiac MR images of the human he…☆12Jul 18, 2021Updated 4 years ago
- What the Package Does (One Line, Title Case)☆13May 16, 2018Updated 7 years ago
- Datasets for open forcefield parameterization and development☆11Sep 22, 2019Updated 6 years ago
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆14Oct 20, 2023Updated 2 years ago
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated last year
- Tabular data imputation and generation, with flexible modeling of quantitative features via hierarchical binning (TMLR, 2025)☆16Mar 10, 2025Updated last year
- Load Avro data into Spark with sparklyr☆12Jun 4, 2020Updated 5 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- Repository for the online book "Guide to Effect Sizes and Confidence Intervals"☆18Jan 16, 2024Updated 2 years ago
- Preprocessing and analysis of physiological waveforms☆11Jan 19, 2023Updated 3 years ago
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- ☆10Nov 3, 2023Updated 2 years ago
- A benchmark on predicting how small molecules change gene expression in different cell types.☆18Jul 4, 2025Updated 9 months ago
- 🎵 Partnership with AI to create Beats☆10Oct 13, 2020Updated 5 years ago
- Segmentation of liver computed tomography images with a UNET.☆16Mar 29, 2023Updated 3 years ago
- Tools for visualizing genomics data☆70Oct 26, 2021Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆16May 22, 2025Updated 10 months ago
- A tool for analyzing and visualizing discrete temporal events☆17Aug 15, 2018Updated 7 years ago
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆43May 25, 2024Updated last year
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆14Jan 10, 2021Updated 5 years ago
- Services and guidelines for normalizing variants☆15Updated this week
- ☆10Mar 20, 2024Updated 2 years ago
- ☆12Sep 11, 2019Updated 6 years ago
- R package to provide API to Melbourne pedestrian data☆12Nov 13, 2022Updated 3 years ago
- Proof Of Concept - Open Patient Pathway Generator using and an agent based approach☆12Apr 4, 2023Updated 3 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Offerspill's advent calendar☆13Nov 3, 2023Updated 2 years ago
- An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests☆14May 27, 2025Updated 10 months ago
- Public code from paper: 'Towards a decision support tool for intensive care discharge: machine learning algorithm development using elect…☆10Jun 4, 2019Updated 6 years ago
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆12Feb 25, 2026Updated last month
- LORIS: A LOgistic Regression-based Immunotherapy-response Score☆16Nov 18, 2024Updated last year
- Lightweight, portable variation registration and retrieval☆16Mar 30, 2026Updated last week
- A compilation of some of the packages that analysts & clinicians in the NHS-R community find useful☆17Apr 29, 2022Updated 3 years ago