EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery
☆22Oct 3, 2024Updated last year
Alternatives and similar repositories for EmbedGEM
Users that are interested in EmbedGEM are comparing it to the libraries listed below
Sorting:
- Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatio…☆14Oct 22, 2025Updated 4 months ago
- Channel Vision Transformers: An Image Is Worth C x 16 x 16 Words☆71Feb 22, 2024Updated 2 years ago
- UNCURL is a tool for single cell RNA-seq data analysis.☆15Jun 27, 2022Updated 3 years ago
- Course on graph machin learning.☆12Mar 24, 2023Updated 2 years ago
- Machine Learning using marginalized graph kernel for chemical molecules.☆13Mar 15, 2024Updated 2 years ago
- Repository for transferGWAS, a deep learning method for performing genome-wide association studies on full medical imaging data.☆14Jul 29, 2022Updated 3 years ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- Meta-analysis of drug target evidence in single-cell data☆16Oct 22, 2024Updated last year
- Classification of Images using Support Vector Machines and Feature Extraction using SIFT.☆14Nov 27, 2020Updated 5 years ago
- ☆20Oct 26, 2023Updated 2 years ago
- Configs and descriptions of circos plots created on FUMA web application☆15Dec 10, 2017Updated 8 years ago
- This repository contain a dataset describing the urgency of admission among COVID-19 patients, intended for use in a predictive modeling …☆10Mar 16, 2020Updated 6 years ago
- An image segmentation project using PyTorch to segment the Left Atrium in 3D Late gadolinium enhanced - cardiac MR images of the human he…☆12Jul 18, 2021Updated 4 years ago
- What the Package Does (One Line, Title Case)☆13May 16, 2018Updated 7 years ago
- Calculate DNA methylation age using Horvath 2013 method☆11Aug 25, 2017Updated 8 years ago
- R package for processing and analysing light logger and optical radiation dosimeter data☆18Updated this week
- Get an intuitive sense for the ROC curve and other binary classification metrics with interactive visualization.☆16Dec 29, 2024Updated last year
- Cache the return values of your Python functions with a simple decorator.☆11Jan 17, 2017Updated 9 years ago
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆14Oct 20, 2023Updated 2 years ago
- Gaussian Process Classification and Regression on Apache Spark☆11Mar 29, 2021Updated 4 years ago
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated last year
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆28Aug 9, 2023Updated 2 years ago
- ☆13Jul 1, 2021Updated 4 years ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- Repository for the online book "Guide to Effect Sizes and Confidence Intervals"☆18Jan 16, 2024Updated 2 years ago
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- ☆10Nov 3, 2023Updated 2 years ago
- Segmentation of liver computed tomography images with a UNET.☆16Mar 29, 2023Updated 2 years ago
- A benchmark on predicting how small molecules change gene expression in different cell types.☆17Jul 4, 2025Updated 8 months ago
- Tools for visualizing genomics data☆69Oct 26, 2021Updated 4 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- bioinfo workflow based on snakemake☆14Feb 22, 2024Updated 2 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆11Feb 25, 2022Updated 4 years ago
- Adversarial_Autoencoders手写数字识别, pytorch版本☆14Nov 3, 2021Updated 4 years ago
- A tool for analyzing and visualizing discrete temporal events☆17Aug 15, 2018Updated 7 years ago
- ClusterScan, search for clusters of features in a given annotation.☆11Aug 26, 2021Updated 4 years ago
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆43May 25, 2024Updated last year
- Model training for ISwine☆14Jun 9, 2020Updated 5 years ago
- ☆12Sep 11, 2019Updated 6 years ago