dynverse / dynwrapLinks
A common data format and inference environment for single-cell trajectories 📦
☆17Updated 2 years ago
Alternatives and similar repositories for dynwrap
Users that are interested in dynwrap are comparing it to the libraries listed below
Sorting:
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆31Updated 3 years ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- Gene-level general linear mixed model☆23Updated 2 weeks ago
- ☆25Updated 4 months ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆40Updated last year
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 3 months ago
- Cancer Dependency Map package☆30Updated last year
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- Core utilities for single-cell RNA-seq☆12Updated 6 months ago
- R package for detecting differential distributions using a statistical test based on the wasserstein distance☆27Updated 2 years ago
- A General Framework for Consensus Partitioning☆63Updated 8 months ago
- An R package to plot interactive three-way differential expression analysis☆38Updated 2 years ago
- An R package for visualising cell-cell interactions☆43Updated last year
- Clone of the Bioconductor repository for the scRNAseq package.☆29Updated last week
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 6 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Differential Expression with Capture Efficiency adjustmeNT☆14Updated 2 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 4 years ago
- A Tidy Framework to Hack Gene Expression Signatures☆19Updated 6 months ago
- R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)☆36Updated 9 months ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated last month
- ☆16Updated last year
- Toolkit for Single-Cell Velocity☆59Updated 3 months ago
- Single-cell analysis with non-negative matrix factorization☆45Updated 2 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- ☆16Updated 7 months ago