dynverse / dynwrapLinks
A common data format and inference environment for single-cell trajectories 📦
☆19Updated 2 months ago
Alternatives and similar repositories for dynwrap
Users that are interested in dynwrap are comparing it to the libraries listed below
Sorting:
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- Human brain, >200,000 nuclei☆23Updated 4 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Updated 4 years ago
- ☆27Updated 8 months ago
- R package for detecting differential distributions using a statistical test based on the wasserstein distance☆27Updated 3 months ago
- Gene-level general linear mixed model☆24Updated 4 months ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 3 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- Brings SingleCellExperiment objects to the tidyverse☆37Updated 2 months ago
- An R package for visualising cell-cell interactions☆46Updated last year
- R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)☆36Updated last year
- R package of techniques for comparing clusterings of single-cell sequencing data☆41Updated last year
- Integrating zingeR with ZINB-WaVE weights☆26Updated 7 years ago
- An R Package for Geneset Enrichment Workflows☆78Updated last month
- This repository contained single-cell RNA-seq datasets with ICB treated patients☆13Updated last year
- A General Framework for Consensus Partitioning☆65Updated last week
- Single-cell analysis with non-negative matrix factorization☆47Updated 6 months ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 4 months ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆33Updated 5 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 6 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- Toolkit for Single-Cell Velocity☆59Updated 7 months ago
- An analytics package for single cell data☆22Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Updated 6 years ago
- An r package that works as a wrapper to homologene☆49Updated 2 years ago
- ☆16Updated 10 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Core utilities for single-cell RNA-seq☆12Updated 9 months ago
- See https://github.com/LTLA/SingleRBook for the latest version of this content.☆12Updated 3 years ago