Predicting Cellular Responses with Variational Causal Inference and Refined Relational Information (ICLR 2023)
☆18Jun 15, 2025Updated last year
Alternatives and similar repositories for graphVCI
Users that are interested in graphVCI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- code for paper: Identifiability Guarantees for Causal Disentanglement from Soft Interventions☆16Nov 27, 2023Updated 2 years ago
- Regulatory Temporal Interaction Network Inference☆16Mar 11, 2026Updated 5 months ago
- ☆12Aug 19, 2025Updated last year
- ☆35Oct 4, 2020Updated 5 years ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆150Aug 14, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Counterfactual Generative Modeling with Variational Causal Inference (ICLR 2025)☆21Sep 30, 2025Updated 11 months ago
- A Unified RNA Sequencing Model (URSM) for joint analysis of single cell and bulk RNA-seq data.☆11Oct 20, 2017Updated 8 years ago
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆404Feb 1, 2025Updated last year
- EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery☆23Oct 3, 2024Updated last year
- GrandPrix☆17May 27, 2019Updated 7 years ago
- ☆95Jul 18, 2025Updated last year
- Single-Cell (Perturbation) Model Library☆128Jul 27, 2026Updated last month
- ☆30Oct 14, 2024Updated last year
- ☆19Jun 23, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell lev…☆186Sep 7, 2023Updated 2 years ago
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆16Oct 20, 2023Updated 2 years ago
- ☆22Mar 16, 2019Updated 7 years ago
- Learning Single-Cell Perturbation Responses using Neural Optimal Transport☆181Oct 31, 2024Updated last year
- Factorize-Recover for Perturb-seq analysis (FR-Perturb)☆26Nov 4, 2025Updated 10 months ago
- Causal Agent based on Large Language Model☆63Sep 7, 2025Updated 11 months ago
- ☆13Feb 2, 2026Updated 7 months ago
- ☆11Oct 9, 2022Updated 3 years ago
- Code and example of the D-SPIN framework☆40Aug 5, 2026Updated 3 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆52Jan 17, 2022Updated 4 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆15Mar 14, 2024Updated 2 years ago
- Git Repo for simulating Boolean Models☆40Nov 7, 2025Updated 9 months ago
- NUAA操作系统实验 平时作业及往年考试题记录☆11Jul 1, 2022Updated 4 years ago
- ☆15Sep 30, 2023Updated 2 years ago
- This tool designs guides for use with the base editor technology.☆13Aug 11, 2023Updated 3 years ago
- Paper collection about de novo peptide Sequening☆24Feb 5, 2025Updated last year
- ☆10Mar 5, 2019Updated 7 years ago
- Implementation of the Latent CCM paper☆18Jun 8, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Probabilistic Programming in Julia☆14Mar 19, 2024Updated 2 years ago
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆18Oct 17, 2024Updated last year
- Active learning for optimal intervention design in causal models☆17Nov 8, 2023Updated 2 years ago
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆71Jun 6, 2020Updated 6 years ago
- Supervised Vector-Quantized Autoencoder☆20Jul 6, 2021Updated 5 years ago
- Analysis code for the TAP-seq manuscript.☆11Jun 25, 2021Updated 5 years ago
- Supplementary files for paper "Detection and removal of barcode swapping in single-cell RNAseq".☆11Jul 5, 2018Updated 8 years ago