yulun-rayn / graphVCILinks
Predicting Cellular Responses with Variational Causal Inference and Refined Relational Information (ICLR 2023)
☆19Updated 2 months ago
Alternatives and similar repositories for graphVCI
Users that are interested in graphVCI are comparing it to the libraries listed below
Sorting:
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆52Updated 3 years ago
- ☆47Updated last month
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆109Updated last year
- ☆81Updated last year
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆43Updated 2 years ago
- ☆85Updated 2 years ago
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆44Updated last month
- Comprehensive suite for evaluating perturbation prediction models☆71Updated last week
- ☆28Updated 4 years ago
- Models and datasets for perturbational single-cell omics☆162Updated 3 years ago
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 2 years ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆140Updated 6 months ago
- ☆63Updated 2 years ago
- A model developed for the generation of scRNA-seq data☆68Updated 6 months ago
- ☆17Updated 4 years ago
- Modeling complex perturbations with CellFlow☆83Updated this week
- Diffusion model for gene regulatory network inference.☆23Updated last month
- ☆56Updated last year
- ☆32Updated 4 months ago
- ☆15Updated 3 years ago
- scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models☆29Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆66Updated 2 years ago
- Functional and Learnable Cell dynamicS☆17Updated 3 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆63Updated 10 months ago
- ☆59Updated 11 months ago
- ☆36Updated 3 months ago
- Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network☆103Updated 2 years ago
- Single-cell biological network inference using a heterogeneous graph transformer☆73Updated 6 months ago
- ☆37Updated 3 months ago