yulun-rayn / graphVCILinks
Predicting Cellular Responses with Variational Causal Inference and Refined Relational Information (ICLR 2023)
☆19Updated 5 months ago
Alternatives and similar repositories for graphVCI
Users that are interested in graphVCI are comparing it to the libraries listed below
Sorting:
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆53Updated 3 years ago
- ☆64Updated 4 months ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆119Updated last year
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆46Updated 2 years ago
- ☆87Updated last year
- Modeling complex perturbations with CellFlow☆102Updated last week
- Diffusion model for gene regulatory network inference.☆23Updated 4 months ago
- ☆43Updated 5 months ago
- Models and datasets for perturbational single-cell omics☆168Updated 3 years ago
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆57Updated 5 months ago
- ☆65Updated last month
- ☆32Updated 5 years ago
- ☆86Updated 2 years ago
- ☆58Updated last year
- ☆34Updated 7 months ago
- ☆63Updated 2 years ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆156Updated 9 months ago
- ☆86Updated last month
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 3 years ago
- Comprehensive suite for evaluating perturbation prediction models☆112Updated 3 weeks ago
- Additional code and analysis from the single-cell integration benchmarking project☆69Updated 2 years ago
- Single-cell biological network inference using a heterogeneous graph transformer☆76Updated 9 months ago
- ☆18Updated 4 years ago
- scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models☆32Updated last year
- Functional and Learnable Cell dynamicS☆19Updated 6 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆64Updated last year
- ☆34Updated 7 months ago
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- A model developed for the generation of scRNA-seq data☆79Updated 9 months ago
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆31Updated 4 months ago