jorainer / ensembldbLinks
This is the ensembldb development repository.
☆35Updated 2 months ago
Alternatives and similar repositories for ensembldb
Users that are interested in ensembldb are comparing it to the libraries listed below
Sorting:
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- R interface to genome annotation files and the UCSC genome browser☆35Updated 2 weeks ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last month
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆35Updated last year
- Transcript quantification import with automatic metadata detection☆67Updated last month
- Template for building a bioconductor workshop package using github actions☆21Updated 4 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Differential expression and allelic analysis, nonparametric statistics☆30Updated 10 months ago
- Create QC and summary reports for Alevin output☆31Updated 2 weeks ago
- interactive plots for differential expression analysis☆34Updated 4 months ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆25Updated this week
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- The blog of tidyomics☆14Updated 4 months ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 5 months ago
- Representation and manipulation of genomic intervals☆46Updated 2 weeks ago
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆28Updated 2 weeks ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 3 weeks ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 10 months ago
- Glimma R package☆50Updated last year
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 7 months ago
- ☆17Updated 2 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 6 months ago
- Introduction to the Bioconductor project☆18Updated 3 weeks ago
- ☆29Updated last year
- Toolbox package for organizing and working with TCGA data☆28Updated this week
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- Client for the Bioconductor AnnotationHub web resource☆19Updated 2 weeks ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated last week
- Gene-level general linear mixed model☆23Updated last month