Genometric / MSPC
Using combined evidence from replicates to evaluate ChIP-seq peaks
☆20Updated 3 weeks ago
Alternatives and similar repositories for MSPC:
Users that are interested in MSPC are comparing it to the libraries listed below
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 7 years ago
- interactive plots for differential expression analysis☆32Updated last week
- Peak calling tool for CLIP-seq data☆14Updated 3 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆25Updated 2 weeks ago
- Universal RObust Peak Annotator☆15Updated last year
- ☆32Updated last year
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- Transcript quantification import with automatic metadata detection☆67Updated 2 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 2 years ago
- Genomic data interpretation and visualization Workshop☆19Updated last year
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 2 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago
- Genomic plot in trellis layout☆39Updated last year
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- Opossum is a tool to pre-process RNA-seq reads prior to variant calling.☆28Updated 6 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆28Updated 5 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 7 months ago
- Differential expression and allelic analysis, nonparametric statistics☆28Updated 2 months ago
- Using k-mers to call HLA alleles in RNA sequencing data☆22Updated 6 years ago
- TSIS: an R package to infer time-series isoform switch of alternative splicing☆3Updated last year
- ☆12Updated 9 years ago
- Personal diploid genome creation and coordinate conversion☆24Updated this week
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆28Updated 9 years ago
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆10Updated last year
- ☆16Updated 6 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- Version II of Mandalorion☆32Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 8 months ago