Project Manager for NGS data analysis
☆31Jul 10, 2026Updated last month
Alternatives and similar repositories for pm4ngs
Users that are interested in pm4ngs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of CWL tools and workflows used by NCBI Computational Biology Branch for NGS data analysis☆29Jun 29, 2026Updated 2 months ago
- StxTyper uses a standardized algorithm to accurately type both known and unknown Shiga toxin operons from assembled genomic sequence.☆19Aug 28, 2026Updated last week
- ☆10Jun 5, 2021Updated 5 years ago
- Using combined evidence from replicates to evaluate ChIP-seq peaks☆22Mar 14, 2026Updated 5 months ago
- A cookiecutter template that reflects my favored structure for setting up Snakemake-based analysis pipelines.☆16Jul 25, 2016Updated 10 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated 2 years ago
- TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files☆138Jan 28, 2026Updated 7 months ago
- BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy …☆75Dec 4, 2024Updated last year
- HiCOPS: Computational framework for peptide identification from MS data through accelerated database search☆10Mar 24, 2023Updated 3 years ago
- dbGaP data validation tool repo☆14May 12, 2023Updated 3 years ago
- Main repository of the Flint project for Spark and Amazon EMR.☆11Jan 31, 2020Updated 6 years ago
- abawaca is a binning program for metagenomics☆13May 20, 2017Updated 9 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Aug 9, 2018Updated 8 years ago
- Scripts required to calculate tetramer frequencies and create input files for ESOM. See: Dick, G.J., A. Andersson, B.J. Baker, S.S. Simmo…☆17Feb 17, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- the toolbox for Microbial and personalized GEM, REactiobiome and community NEtwork modelling☆11Feb 3, 2024Updated 2 years ago
- Clustering tool for biomolecular structural ensembles and data in general.☆10Aug 24, 2020Updated 6 years ago
- Protein Structure Archiver☆15Sep 10, 2025Updated 11 months ago
- Genome scale metabolic models in SBML format☆11Nov 16, 2021Updated 4 years ago
- PAgeRAnk-flux on Graphlet-guided network for multi-Omic data integratioN - Network Inference☆11Nov 12, 2024Updated last year
- ☆29Feb 23, 2026Updated 6 months ago
- Deconvolution of RNA Alternative COnformations☆15Jun 24, 2026Updated 2 months ago
- NLM Medical Text Indexer (MTI)☆10May 18, 2022Updated 4 years ago
- Provide machine-readable descriptions of your data assets☆24Jul 2, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- IMGT segment library converted to RepSeq.IO JSON format☆14Mar 21, 2023Updated 3 years ago
- Service discovery for Finagle cluster with Consul.☆10Sep 27, 2018Updated 7 years ago
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Oct 19, 2019Updated 6 years ago
- Supplementary information to "Computational correction of index switching in multiplexed sequencing libraries" (Larsson et. al 2018).☆15Nov 3, 2020Updated 5 years ago
- This repository contains the source code of JUDI, a workflow management system for developing complex bioinformatics software with many p…☆33Dec 23, 2021Updated 4 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆33Jul 13, 2023Updated 3 years ago
- Documentation for NCBI BLAST AMI☆11Feb 28, 2022Updated 4 years ago
- ChIP-seq peak-calling, QC and differential analysis pipeline (Snakemake port of the nextflow pipeline at https://nf-co.re/chipseq).☆26Feb 3, 2022Updated 4 years ago
- A collection of tools to work with Illumina's basespace☆13Apr 10, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Introduction to Workflows with Common Workflow Language☆11Apr 17, 2024Updated 2 years ago
- Sefaria for iOS and Android☆42Aug 31, 2026Updated last week
- ☆12Sep 17, 2024Updated last year
- Python package for creating, calibrating and simulating RBA models☆14Aug 19, 2026Updated 2 weeks ago
- ☆10Mar 5, 2019Updated 7 years ago
- Miscellaneous scripts☆24Sep 7, 2016Updated 10 years ago
- ☆11Oct 21, 2023Updated 2 years ago