DeepMIALab / PathoSegLinks
☆18Updated 2 years ago
Alternatives and similar repositories for PathoSeg
Users that are interested in PathoSeg are comparing it to the libraries listed below
Sorting:
- ☆15Updated 9 months ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆52Updated last year
- Tools to build deep learning pipelines.☆112Updated last year
- ☆17Updated 10 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆44Updated 7 months ago
- The code used in the study.☆11Updated 2 years ago
- Awesome Domain Generalization for Computational Pathology☆19Updated last year
- A pan-cancer platform for mutation prediction from routine histology☆69Updated 4 years ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated 11 months ago
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆37Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆26Updated last week
- MOMA☆53Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆75Updated 9 months ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆56Updated last year
- One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification☆99Updated last year
- Deep learning model for the prediction of microsatellite instability in colorectal cancer: a diagnostic study☆30Updated 4 years ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆85Updated last year
- Multimodal prototyping for cancer survival prediction - ICML 2024☆103Updated 9 months ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆45Updated 5 years ago
- Unsupervised Semantic Segmentation for Pathology☆17Updated last year
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆37Updated last year
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated last year
- This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.☆83Updated 8 months ago
- Midnight - Pathology foundation models trained on orders of magnitude fewer WSIs☆27Updated 2 weeks ago
- ☆20Updated 2 years ago
- Awesome List of Digital and Computational Pathology Resources☆94Updated 10 months ago
- A code for extracting annotated regions from whole slide images (WSIs) anotated in Aperio Imagescope☆12Updated 5 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆110Updated 10 months ago
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆25Updated 3 months ago
- Solid Tumor Associative Modeling in Pathology☆102Updated last week