Alternatives and similar repositories for MVI_HCC

Users that are interested in MVI_HCC are comparing it to the libraries listed below

• AndersonHu85 / ccRCC_multiomics
  ☆17Updated 2 years ago
• ruoyan-li / RCC-spatial-mapping
  Code relating to http://dx.doi.org/10.2139/ssrn.4132721
  ☆11Updated 3 years ago
• Famingzhao / NEPAL_RawCode
  NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…
  ☆15Updated last year
• guangchunhan / LUAD_Code
  ☆25Updated 2 years ago
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆28Updated 3 years ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆32Updated 10 months ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 3 years ago
• sunnyzwu / stromal_subclasses
  code for data processing and visualisation associated with the stromal subclasses manuscript
  ☆13Updated 5 years ago
• xmuyulab / ims_gene_signature
  Ratio of the interferon-γ signature to the immunosuppression signature predicts anti-PD-1 therapy response in melanoma
  ☆12Updated 2 years ago
• Teichlab / SKM_ageing_atlas
  ☆13Updated last year
• youqiongye / CRC_scRNAseq
  ☆48Updated 3 years ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆31Updated 3 years ago
• marcalva / hcc_sc_2022
  HCC single cell analysis for Alvarez, Benhammou et al.
  ☆17Updated 3 years ago
• zdq0808 / TMEscore
  Calculating Tumor microenvironment score
  ☆29Updated 2 years ago
• lfranzen / spatial-lung-fibrosis
  Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…
  ☆29Updated last year
• pritykinlab / ulipstic-analysis
  ☆10Updated last year
• pancancer / myeloid
  Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…
  ☆12Updated 2 years ago
• yliuup / NPC-TLS
  ☆13Updated last year
• PaulingLiu / metaICB
  ☆22Updated 2 years ago
• JerryZhang-1222 / starTracer
  A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis
  ☆33Updated last year
• strangephone / EENT-ONB
  scRNA-seq analysis of EENT-ONB
  ☆22Updated last year
• liziyie / Onco-fetal-CAF-in-HCC
  ☆22Updated 2 years ago
• tiroshlab / Spatial_Glioma
  Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
  ☆53Updated last year
• lifei176 / Single-cell-atlas-of-sex-differences-and-androgen-effects
  ☆17Updated last year
• yunshun / HumanBreast10X
  ☆28Updated 3 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆30Updated 2 years ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆39Updated 5 years ago
• yingyonghui / CommPath
  R toolkit for inference and analysis of pathway-mediated cell-cell communication chain from single-cell transcriptomics
  ☆36Updated 9 months ago
• aliceygao / pan-Fibroblast
  ☆54Updated last year
• wanglabtongji / SpaceScanner
  Scanner of specific spatial patterns in tissues
  ☆14Updated 3 years ago