rotifergirl / EvoEco-ECR-brainstormingLinks
☆10Updated 5 years ago
Alternatives and similar repositories for EvoEco-ECR-brainstorming
Users that are interested in EvoEco-ECR-brainstorming are comparing it to the libraries listed below
Sorting:
- GONE: Scripts, programs and an example data set☆47Updated 3 months ago
- MSMC2 Scripts☆27Updated last month
- Presentations from the course☆38Updated 2 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆21Updated last year
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆31Updated 2 weeks ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- ☆53Updated 4 months ago
- Tutorial about R package PopGenome☆44Updated 6 years ago
- A program to call variants from genome alignment☆81Updated 6 months ago
- Simple tool for capturing alignment regions with sufficient quality for genotyping.☆21Updated 4 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated last year
- info and docs for the Wright Lab☆15Updated 9 years ago
- Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV☆16Updated 9 months ago
- Topology weighting by iterative sampling of sub-trees☆81Updated 9 months ago
- ☆13Updated 8 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆38Updated last year
- An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…☆67Updated last year
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- Tools and Utilities for msmc and msmc2☆48Updated 2 months ago
- A pipeline that accepts a VCF file to run through Admixture☆63Updated 9 months ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆83Updated 4 years ago
- Graph-aware Retrieval of Selective Sweeps☆22Updated last year
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- ☆24Updated 8 years ago
- loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genom…☆22Updated last week
- ☆44Updated 8 years ago
- GBSX: a toolkit for experimental design and demultiplexing genotyping by sequencing experiments☆18Updated 9 years ago
- Quantifying Introgression via Branch Lengths☆54Updated 3 years ago