js2264 / VplotRLinks
R package to easily generate "V-plots" of paired-end sequencing data over regions of interest
☆11Updated last year
Alternatives and similar repositories for VplotR
Users that are interested in VplotR are comparing it to the libraries listed below
Sorting:
- A tidyverse and grammar of graphics powered line traces visualizer☆30Updated last year
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- interactive plots for differential expression analysis☆32Updated 3 weeks ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Integrative analysis of structural variations.☆40Updated last year
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 2 years ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 6 months ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- ☆28Updated 7 months ago
- Documentation for vcfR☆11Updated 2 months ago
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated 4 months ago
- a set of NGS pipelines☆24Updated 2 weeks ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Updated 6 months ago
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆28Updated 3 weeks ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Updated 3 years ago
- ☆25Updated 3 weeks ago
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆43Updated last month
- ☆15Updated last year
- Genomic plot in trellis layout☆40Updated last year
- R interface to the JBrowse 2 Linear Genome View.☆37Updated last year
- ☆29Updated last year
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- ☆13Updated 9 years ago
- Evolutionary Transcriptomics with R☆44Updated last week
- R package wrapping bedtools☆41Updated 3 months ago
- ☆16Updated 2 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 4 months ago
- Interactive eQTL visualizations☆13Updated 2 years ago