DeepGraphLearning / ESM-GearNetLinks
ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)
☆111Updated 2 years ago
Alternatives and similar repositories for ESM-GearNet
Users that are interested in ESM-GearNet are comparing it to the libraries listed below
Sorting:
- ☆209Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆122Updated 10 months ago
- ☆131Updated 6 months ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆119Updated last month
- PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence da…☆122Updated 2 weeks ago
- ☆108Updated 2 years ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆143Updated 6 months ago
- An awesome & curated list of docking papers☆119Updated 9 months ago
- ☆144Updated 4 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆97Updated 7 months ago
- ☆97Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆100Updated 8 months ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆225Updated last year
- ☆33Updated 9 months ago
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆205Updated 8 months ago
- Papers about Structure-based Drug Design (SBDD)☆136Updated 3 months ago
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆37Updated 2 years ago
- Masif seed paper repository☆167Updated 3 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆47Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆101Updated 2 years ago
- ☆137Updated 6 months ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆71Updated last week
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆159Updated 3 weeks ago
- ☆119Updated 6 months ago
- ☆129Updated last year
- Implementation of PocketXMol, the pocket-interacting molecular generative foundation model.☆99Updated 3 weeks ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆70Updated 9 months ago
- ☆76Updated 10 months ago
- Codes for our paper "UniMoMo: Unified Generative Modeling of 3D Molecules for De Novo Binder Design" (ICML 2025)☆77Updated 2 weeks ago
- Diffusion model based protein-ligand flexible docking method☆115Updated last year