Alternatives and similar repositories for GAT-GO:

Users that are interested in GAT-GO are comparing it to the libraries listed below

• DeepGraphLearning / esm-s
  Structure-Informed Protein Language Model
  ☆32Updated last year
• LLNL / CRPCA
  Computationally Restoring the Potency of a Clinical Antibody
  ☆18Updated last year
• jas-preet / SPOT-Contact-LM
  The standalone version / cli-tool of SPOT-Contact-Single available for public use for research purposes.
  ☆16Updated last year
• luwei0917 / AlphaFold3_PPI
  ☆14Updated 10 months ago
• violet-sto / Bridge-IF
  Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"
  ☆12Updated last month
• ak422 / DDAffinity
  ☆19Updated 7 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆34Updated 7 months ago
• bzho3923 / ProtLGN
  ☆30Updated 8 months ago
• protddg-bench / protddg-bench
  Scoring methods for predicting the DDG upon protein mutation
  ☆14Updated 2 years ago
• WeiLab-Biology / DeepProSite
  ☆32Updated last year
• Furman-Lab / PatchMAN
  ☆26Updated 8 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆25Updated 9 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆32Updated 5 months ago
• ai4protein / ProtSSN
  🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…
  ☆62Updated 3 months ago
• PKUliujl / GeoSeqBuilder
  ☆26Updated 2 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆32Updated last month
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• tommyhuangthu / EvoEF2
  a fast and accurate physical energy function extended from EvoEF for protein sequence design
  ☆29Updated last year
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆26Updated last year
• danny305 / StabilityOracle
  ☆25Updated 10 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆22Updated last year
• YAndrewL / CLAPE
  contrastive learning and pre-trained encoder for protein-ligand binding sites prediction
  ☆30Updated 3 months ago
• smiles724 / PeptideDesign
  ☆22Updated 3 months ago
• TencentAILabHealthcare / PALM
  ☆43Updated last year
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆24Updated last month
• sokrypton / roscon2024
  Tutorial files
  ☆11Updated 8 months ago
• ddd9898 / DeepNano
  Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.
  ☆32Updated 4 months ago
• jbderoo / PAbFold
  Epitope Prediction Pipeline and analysis tools built around AlphaFold 2
  ☆18Updated 11 months ago
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆27Updated 8 months ago
• bzho3923 / CPDiffusion
  ☆23Updated 6 months ago