Structure-Informed Protein Language Model
☆40Feb 15, 2024Updated 2 years ago
Alternatives and similar repositories for esm-s
Users that are interested in esm-s are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 3 years ago
- ☆42Mar 30, 2025Updated last year
- Pretrained METL models with minimal dependencies☆16Updated this week
- ☆10Jun 28, 2025Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆107Apr 24, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Ligand-binding site classification with deep graph neural networks.☆10Sep 24, 2023Updated 2 years ago
- Transfer learning for Mutation Effect Prediction☆17Feb 13, 2024Updated 2 years ago
- ☆37Feb 4, 2026Updated 7 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆50Nov 4, 2025Updated 10 months ago
- Efficient implementatin of ESM family.☆86Sep 9, 2025Updated last year
- Adapting protein language models for structure-conditioned design☆43Aug 5, 2024Updated 2 years ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆116Oct 23, 2023Updated 2 years ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆72Aug 13, 2025Updated last year
- Making Protein folding accessible to all!☆26Mar 22, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆162Jul 20, 2026Updated last month
- ☆100Oct 15, 2024Updated last year
- Domain-PFP is a self-supervised method to predict protein functions from the domains☆13Nov 1, 2023Updated 2 years ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 2 years ago
- ☆40Jun 20, 2022Updated 4 years ago
- ☆135May 19, 2026Updated 4 months ago
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)☆217May 15, 2026Updated 4 months ago
- Representation learning for protein functional site analysis☆17Aug 11, 2023Updated 3 years ago
- ML toolset for creating TED: The Encyclopedia of Domains☆29May 29, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Detection of remote homology by comparison of protein language model representations☆65Dec 16, 2024Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆272Sep 9, 2026Updated last week
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆45Mar 22, 2026Updated 5 months ago
- Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)☆19Aug 3, 2026Updated last month
- ☆28Oct 30, 2023Updated 2 years ago
- A program fror inter-protein contact prediction from structures of interacting proteins☆22Jun 1, 2024Updated 2 years ago
- A compilation of deep learning methods for protein design☆95Nov 5, 2022Updated 3 years ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".☆19Jan 4, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆260Jul 31, 2024Updated 2 years ago
- Enzyme Activity Prediction of Sequence Variants onNovel Substrates using Improved Substrate Encodings and Convolutional Pooling☆18Nov 28, 2022Updated 3 years ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆88Apr 21, 2026Updated 4 months ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- open source repository☆149Nov 30, 2023Updated 2 years ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆97Jul 20, 2026Updated last month
- Machine learning prediction of enzyme optimum pH☆57Apr 29, 2025Updated last year