Structure-Informed Protein Language Model
☆40Feb 15, 2024Updated 2 years ago
Alternatives and similar repositories for esm-s
Users that are interested in esm-s are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆43Mar 30, 2025Updated last year
- Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)☆19Aug 3, 2026Updated 2 months ago
- Adapting protein language models for structure-conditioned design☆43Aug 5, 2024Updated 2 years ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆107Apr 24, 2024Updated 2 years ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆116Oct 23, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆72Aug 13, 2025Updated last year
- ☆10Jun 28, 2025Updated last year
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 3 years ago
- Ligand-binding site classification with deep graph neural networks.☆10Sep 24, 2023Updated 3 years ago
- ☆100Oct 15, 2024Updated 2 years ago
- Efficient implementatin of ESM family.☆89Sep 9, 2025Updated last year
- Pretrained METL models with minimal dependencies☆18Sep 16, 2026Updated last month
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆50Nov 4, 2025Updated 11 months ago
- ☆38Feb 4, 2026Updated 8 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Transfer learning for Mutation Effect Prediction☆17Feb 13, 2024Updated 2 years ago
- ML toolset for creating TED: The Encyclopedia of Domains☆29May 29, 2025Updated last year
- Profluent-E1 family of Protein Encoder Models☆115Mar 11, 2026Updated 7 months ago
- ☆34Jun 9, 2026Updated 4 months ago
- A Snakemake workflow for recovery of plastid genomes from metagenomic samples☆11Nov 16, 2024Updated last year
- ☆136May 19, 2026Updated 5 months ago
- Bilingual Language Model for Protein Sequence and Structure☆326Mar 6, 2026Updated 7 months ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- ☆13Jul 31, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Protein language model trained on coding DNA☆56Oct 20, 2024Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆239Aug 27, 2025Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆279Sep 9, 2026Updated last month
- We believe that under the current technological conditions, protein structure prediction models determine the upper limit of protein desi…☆11Oct 20, 2026Updated last week
- ☆261Jul 31, 2024Updated 2 years ago
- Scripts for finding restriction-modification systems in bacterial genomes.☆10Nov 9, 2023Updated 2 years ago
- Making Protein folding accessible to all!☆26Mar 22, 2026Updated 7 months ago
- Protein Structure Transformer (PST): Endowing pretrained protein language models with structural knowledge☆46Oct 17, 2024Updated 2 years ago
- ☆40Jun 20, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Public Release of ProGen3 family of Models☆114Jul 21, 2025Updated last year
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆90Apr 21, 2026Updated 6 months ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆165Sep 29, 2026Updated last month
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 3 years ago
- Representation learning for protein functional site analysis☆17Aug 11, 2023Updated 3 years ago
- open source repository☆149Nov 30, 2023Updated 2 years ago
- ☆103Jul 24, 2026Updated 3 months ago