Alternatives and similar repositories for DiffDock

Users that are interested in DiffDock are comparing it to the libraries listed below

• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆838Updated 3 weeks ago
• dauparas / ProteinMPNN
  Code for the ProteinMPNN paper
  ☆1,511Updated last year
• baker-laboratory / RoseTTAFold-All-Atom
  ☆762Updated 5 months ago
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆905Updated 3 months ago
• gnina / gnina
  A deep learning framework for molecular docking
  ☆793Updated last week
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆626Updated last year
• ccsb-scripps / AutoDock-Vina
  AutoDock Vina
  ☆848Updated last month
• HannesStark / EquiBind
  EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
  ☆527Updated 8 months ago
• LPDI-EPFL / masif
  MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
  ☆702Updated last year
• Peldom / papers_for_protein_design_using_DL
  List of papers about Proteins Design using Deep Learning
  ☆1,826Updated last week
• microsoft / foldingdiff
  Diffusion models of protein structure; trigonometry and attention are all you need!
  ☆556Updated last year
• generatebio / chroma
  A generative model for programmable protein design
  ☆773Updated last year
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆774Updated 4 months ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆450Updated last year
• microsoft / evodiff
  Generation of protein sequences and evolutionary alignments via discrete diffusion models
  ☆650Updated 5 months ago
• a-r-j / graphein
  Protein Graph Library
  ☆1,141Updated this week
• AspirinCode / papers-for-molecular-design-using-DL
  List of Molecular and Material design using Generative AI and Deep Learning
  ☆882Updated last week
• bjing2016 / alphaflow
  AlphaFold Meets Flow Matching for Generating Protein Ensembles
  ☆492Updated 3 weeks ago
• yangkky / Machine-learning-for-proteins
  Listing of papers about machine learning for proteins.
  ☆1,676Updated last year
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆1,091Updated last week
• HeliXonProtein / OmegaFold
  OmegaFold Release Code
  ☆601Updated 2 years ago
• Graylab / DL4Proteins-notebooks
  Colab Notebooks covering deep learning tools for biomolecular structure prediction and design
  ☆508Updated last month
• microsoft / AI2BMD
  AI-powered ab initio biomolecular dynamics simulation
  ☆551Updated 8 months ago
• dauparas / LigandMPNN
  ☆478Updated 9 months ago
• volkamerlab / teachopencadd
  TeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data
  ☆926Updated this week
• deepmodeling / Uni-Mol
  Official Repository for the Uni-Mol Series Methods
  ☆975Updated 5 months ago
• arneschneuing / DiffSBDD
  A Euclidean diffusion model for structure-based drug design.
  ☆470Updated 4 months ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆386Updated 2 years ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆366Updated last year
• pharmai / plip
  Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake,…
  ☆605Updated 2 weeks ago