UNITES-Lab / CryoNeRFLinks
☆20Updated 8 months ago
Alternatives and similar repositories for CryoNeRF
Users that are interested in CryoNeRF are comparing it to the libraries listed below
Sorting:
- Leveraging Structural Priors and Constraints for Cryo-EM Heterogeneous Reconstruction☆67Updated last year
- DiffModeler: a diffusion model based protein complex structure modeling tool.☆59Updated last month
- A comprehensive foundation model for cryo-EM image processing☆51Updated this week
- [ICLR 2024 Spotlight] The official repo for the paper "De novo Protein Design using Geometric Vector Field Networks".☆30Updated last year
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆69Updated last year
- Code for paper: "Fine-Tuning Discrete Diffusion Models via Reward Optimization with Applications to DNA and Protein Design"☆64Updated 8 months ago
- ☆56Updated 3 months ago
- Diverse and challenging datasets for the heterogeneity problem in cryo-EM☆38Updated 9 months ago
- CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.☆32Updated last year
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆58Updated last year
- ☆42Updated 3 years ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆99Updated last year
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆47Updated 2 years ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆78Updated last year
- Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)☆42Updated 2 years ago
- The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"☆74Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆101Updated 2 years ago
- ☆24Updated last year
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆61Updated last year
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆52Updated 4 months ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆71Updated last year
- diffusion model for protein sequence generation☆50Updated 2 years ago
- The programs for preprocessing cryo-EM density maps for machine learning☆32Updated last year
- deep structural disentanglement☆42Updated last week
- Awesome papers related to generative flow matching and its applications in bioinformatics.☆32Updated last month
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆100Updated 7 months ago
- ☆12Updated last year
- Protein Design with Guided Discrete Diffusion☆139Updated last year
- A standardized protein design benchmark for motif-scaffolding problems☆72Updated 3 weeks ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆124Updated 10 months ago