hadi-abdine / Prot2Text
☆28Updated 5 months ago
Alternatives and similar repositories for Prot2Text:
Users that are interested in Prot2Text are comparing it to the libraries listed below
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆93Updated last year
- PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)☆88Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆102Updated 2 weeks ago
- ☆35Updated last year
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆86Updated last year
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆56Updated last month
- Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.☆91Updated 2 weeks ago
- MSAGPT☆29Updated 3 months ago
- diffusion model for protein sequence generation☆49Updated 2 years ago
- Generative Language Modeling for Antibody Design☆142Updated 5 months ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025☆54Updated 2 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆105Updated 2 months ago
- ☆176Updated 5 months ago
- ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning☆90Updated last week
- Protein Structure Transformer (PST): Endowing pretrained protein language models with structural knowledge☆36Updated 4 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆91Updated last year
- Making Protein Modeling Accessible to All Biologists☆100Updated this week
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆60Updated 7 months ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆72Updated last year
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆50Updated last year
- The first large protein language model trained follows structure instructions.☆75Updated 9 months ago
- Aligning protein generative models with experimental fitness☆85Updated 4 months ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆80Updated 10 months ago
- Dataset and package for working with protein-protein interactions in 3D☆90Updated last month
- Official Implemetation of DPLM (ICML'24) - Diffusion Language Models Are Versatile Protein Learners☆125Updated last week
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆171Updated this week
- ☆64Updated last month
- Pretrainable geometric graph neural network for antibody affinity maturation☆48Updated 6 months ago
- Contrastive learning harmonizing protein language models and natural language models☆30Updated 9 months ago