☆39Jun 9, 2025Updated 10 months ago
Alternatives and similar repositories for Prot2Text
Users that are interested in Prot2Text are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Prot2Text-V2: Protein Function Prediction with Multimodal Contrastive Alignment☆44Oct 23, 2025Updated 6 months ago
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆104Oct 16, 2023Updated 2 years ago
- This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".☆18Jan 4, 2025Updated last year
- Source code for ACL 2024 paper: "ProtT3: Protein-to-Text Generation for Text-based Protein Understanding"☆52May 27, 2024Updated last year
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆112Oct 23, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Contrastive learning harmonizing protein language models and natural language models☆43Jun 12, 2024Updated last year
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆28Jul 14, 2023Updated 2 years ago
- [ACL 2024] ProtLLM: An Interleaved Protein-Language LLM with Protein-as-Word Pre-Training☆50Mar 14, 2024Updated 2 years ago
- ☆17Dec 9, 2024Updated last year
- This is the official repository of Prot2Token paper.☆38Jun 6, 2025Updated 10 months ago
- Evolla: A frontier protein-language generative model designed to decode the molecular language of proteins.☆67Apr 13, 2026Updated 2 weeks ago
- Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)☆19May 24, 2024Updated last year
- This repository contains a PyTorch implementation of the paper "Hierarchical Graph Representation Learning for the Prediction of Drug-Tar…☆12Jul 21, 2022Updated 3 years ago
- A Protein Large Language Model for Multi-Task Protein Language Processing☆210Sep 30, 2025Updated 7 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆152Apr 10, 2026Updated 3 weeks ago
- ☆213Sep 24, 2024Updated last year
- ☆22Mar 6, 2024Updated 2 years ago
- The first large protein language model trained follows structure instructions.☆96May 20, 2025Updated 11 months ago
- The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"☆74Aug 23, 2024Updated last year
- Multimodal encoder-only transformer model for image-based protein predictions☆15Dec 12, 2023Updated 2 years ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆106Jan 11, 2025Updated last year
- ☆17Feb 27, 2026Updated 2 months ago
- Generative Models for Graph-Based Protein Design☆288Dec 24, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Multimodal Pretraining for Unsupervised Protein Representation Learning☆22Jul 30, 2024Updated last year
- A Multi-modal Large Language Model for Molecular Science with Graph, Image, and Text☆38Oct 22, 2025Updated 6 months ago
- Retrieved Sequence Augmentation for Protein Representation Learning☆53Nov 1, 2023Updated 2 years ago
- A collection of AWESOME things about LLM-Centric-Molecular-Discovery.☆26May 20, 2025Updated 11 months ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆593Mar 8, 2026Updated last month
- ☆14Mar 2, 2023Updated 3 years ago
- ☆14Jul 14, 2023Updated 2 years ago
- ☆22Mar 30, 2024Updated 2 years ago
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆184Jun 17, 2023Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆19Jun 27, 2024Updated last year
- A neural based approach to the task of genetic codon optimization☆18Aug 17, 2020Updated 5 years ago
- ☆11Aug 26, 2024Updated last year
- Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through M…☆254Mar 5, 2026Updated last month
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆31Jan 8, 2024Updated 2 years ago
- [COLM'24] We propose Protein Chain of Thought (ProCoT), which replicates the biological mechanism of signaling pathways as language promp…☆73Nov 23, 2025Updated 5 months ago
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆271Apr 27, 2025Updated last year