hadi-abdine / Prot2Text
☆31Updated 7 months ago
Alternatives and similar repositories for Prot2Text
Users that are interested in Prot2Text are comparing it to the libraries listed below
Sorting:
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆97Updated last year
- ☆66Updated last month
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆78Updated 4 months ago
- Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention. (NeurIPS 2024)☆116Updated 2 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆105Updated 2 months ago
- The first large protein language model trained follows structure instructions.☆79Updated 11 months ago
- MSAGPT☆31Updated 5 months ago
- ☆39Updated last year
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆95Updated last year
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆66Updated 3 months ago
- Scalable Deep Learning for RNA Secondary Structure Prediction☆36Updated 10 months ago
- PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)☆89Updated 2 years ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆61Updated 9 months ago
- Contrastive learning harmonizing protein language models and natural language models☆32Updated 11 months ago
- A Biological Foundation Model Bridging the Gap between Molecular Sequences Through Central Dogma☆27Updated 2 months ago
- Protein Structure Transformer (PST): Endowing pretrained protein language models with structural knowledge☆37Updated 7 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆113Updated 2 months ago
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆39Updated 7 months ago
- Generative Language Modeling for Antibody Design☆149Updated 7 months ago
- Large Language Models in Protein: A Comprehensive Survey☆80Updated last month
- ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning☆102Updated 2 weeks ago
- Aligning protein generative models with experimental fitness☆95Updated this week
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆56Updated this week
- ☆70Updated 3 months ago
- The code for "Learning Molecular Representation in a Cell"☆33Updated 2 months ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆83Updated last year
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆12Updated 5 months ago
- Exploring Evolution-aware & free protein language models as protein function predictors☆64Updated 7 months ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆20Updated 8 months ago
- Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through M…☆209Updated last month