ChengF-Lab / autoCell
☆16Updated 2 years ago
Alternatives and similar repositories for autoCell
Users that are interested in autoCell are comparing it to the libraries listed below
Sorting:
- Scripts for data and figure generation in SAVER paper☆17Updated 4 years ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆29Updated 4 years ago
- cTPnet Package☆25Updated 2 years ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆34Updated 10 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆42Updated 8 months ago
- ☆16Updated 2 years ago
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆12Updated last year
- ☆16Updated 10 months ago
- Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data☆24Updated 2 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 2 years ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆24Updated 6 months ago
- ☆45Updated 2 years ago
- ☆10Updated last year
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information☆20Updated 2 years ago
- Code for Universal Single-Cell Matching with Unpaired Feature Sets☆21Updated 3 years ago
- ☆29Updated last month
- ACTIONet single-cell analysis framework☆39Updated 8 months ago
- a simple R data package for curated cancer pathway-specific gene lists☆10Updated 5 years ago
- SoptSC for single cell data analysis: unsupervised inference of clustering, cell lineage, pseudotime and cell-cell communication network …☆21Updated 4 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆28Updated last year
- ☆21Updated 10 months ago
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆23Updated last year
- scTM: A package for topic modelling in transcriptomics data☆20Updated last year
- benchmark for single-cell RNA-seq imputation methods☆25Updated last year
- Spatial direct messaging detected by bivariate Moran☆26Updated 2 weeks ago
- Code used to analyze single cell RNA and ATAC sequencing in developing human brain☆33Updated 3 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆36Updated 4 years ago
- Novel joint clustering method with scRNA-seq and CITE-seq data☆9Updated 3 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆22Updated 4 years ago