SONGDONGYUAN1994 / scsamplerView external linksLinks
☆14Aug 13, 2023Updated 2 years ago
Alternatives and similar repositories for scsampler
Users that are interested in scsampler are comparing it to the libraries listed below
Sorting:
- Research Paper: "Graph Contrastive Learning as a Versatile Foundation for Advanced scRNA-seq Data Analysis"☆10Nov 20, 2024Updated last year
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆26May 12, 2020Updated 5 years ago
- a parallel R package for detecting copy-number alterations from short sequencing reads☆23Jul 15, 2021Updated 4 years ago
- single-cell graph autoencoder☆25Oct 14, 2021Updated 4 years ago
- Pipeline for Universal Mapping of ATAC-seq☆25Sep 23, 2025Updated 4 months ago
- benchmark for single-cell RNA-seq imputation methods☆29Mar 16, 2024Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Dec 22, 2022Updated 3 years ago
- GWAS Survival Package in R☆13Nov 16, 2023Updated 2 years ago
- ☆13Oct 17, 2024Updated last year
- A robust DE test method that accounts for the uncertainty in pseudotime inference☆39Mar 2, 2025Updated 11 months ago
- An R for fast and flexible DNA methylation analysis☆35Dec 9, 2025Updated 2 months ago
- Single-cell generalized trendmodel (scGTM): a flexible and interpretable model for gene expression along cell pseudotime. This is a Pyt…☆12Sep 26, 2023Updated 2 years ago
- ☆10Feb 12, 2019Updated 7 years ago
- Somatic coding and non-coding mutation enrichment analysis for tumor WGS data☆12Jun 16, 2021Updated 4 years ago
- scripts for analyzing data of macrophage development in human☆10Dec 8, 2019Updated 6 years ago
- A novel unsupervised batch removal framework, called iMAP, based on neural networks.☆35Jan 12, 2022Updated 4 years ago
- A GA4GH Draft Beacon implementation☆11Oct 23, 2015Updated 10 years ago
- Probabilistic pseudotime for single-cell RNA-seq data☆10Oct 6, 2017Updated 8 years ago
- DGCIT: Double Generative Adversarial Networks for Conditional Independence Testing☆11Nov 22, 2023Updated 2 years ago
- ☆14Oct 14, 2022Updated 3 years ago
- ☆60Feb 6, 2026Updated last week
- ☆90Jun 24, 2023Updated 2 years ago
- ☆11Jul 6, 2023Updated 2 years ago
- R scripts and executable binder for blog post about using Purrr for mapping over ML hyperparameters☆11May 15, 2019Updated 6 years ago
- A single cell transcriptome atlas of the developing zebrafish hindbrain.☆14Jan 2, 2020Updated 6 years ago
- a simply crawler framework☆12Jun 5, 2023Updated 2 years ago
- An algorithm used to classify the cell types from single cell rna sequence data.☆10Jan 24, 2021Updated 5 years ago
- phy-mer☆11Oct 12, 2017Updated 8 years ago
- A self-hosted service that continuously monitors your Twitter account and deletes old tweets.☆11Mar 12, 2015Updated 10 years ago
- This repository is the demo implementation of [Deep Dimension Reduction for Supervised Representation Learning].☆11Sep 12, 2024Updated last year
- ☆12Jun 29, 2018Updated 7 years ago
- Impute DNA methylation from WGBS data.☆11Apr 23, 2019Updated 6 years ago
- Notebooks for CPA figures☆14Dec 9, 2022Updated 3 years ago
- a simple R data package for curated cancer pathway-specific gene lists☆13Mar 31, 2020Updated 5 years ago
- MultiBreak-SV identifies structural variants from next-generation paired end data, third-generation long read data, or data from a combin…☆12Jul 19, 2016Updated 9 years ago
- Comparison of single cell normalization strategies☆10Aug 13, 2021Updated 4 years ago
- CellRank 2's reproducibility repository.☆15Sep 4, 2024Updated last year
- Bayesian nonparametric clustering in R using DP-means☆12Mar 6, 2020Updated 5 years ago
- 🍁 Collection of useful R utilities and snippets☆10Nov 21, 2023Updated 2 years ago