Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
☆39Jan 6, 2021Updated 5 years ago
Alternatives and similar repositories for scRNAseq_pipelines
Users that are interested in scRNAseq_pipelines are comparing it to the libraries listed below
Sorting:
- This repository contains all code used for the Human Lung Cell Atlas project.☆58Aug 21, 2023Updated 2 years ago
- ☆67Jun 7, 2023Updated 2 years ago
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Jul 5, 2023Updated 2 years ago
- Single-cell Lung Cancer Atlas with 1.2M cells☆87Jan 19, 2025Updated last year
- Repository to perform mapping of new datasets to the Human Lung Cell Atlas.☆20Jun 7, 2023Updated 2 years ago
- ☆17Apr 9, 2021Updated 4 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- ☆19Sep 29, 2021Updated 4 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 3 years ago
- Assembly and Annotation of the Human Immune Health Atlas☆20Aug 28, 2025Updated 6 months ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- ☆47Apr 18, 2020Updated 5 years ago
- cEll tyPe enrIChment☆16Dec 11, 2022Updated 3 years ago
- UHCA☆11Jan 23, 2025Updated last year
- Blastocyst-like structures generated from human pluripotent stem cells☆13Sep 25, 2022Updated 3 years ago
- Breast Cancer Single Cell Atlas☆12Mar 31, 2022Updated 3 years ago
- ☆49Feb 16, 2022Updated 4 years ago
- ☆21Dec 23, 2024Updated last year
- Novel joint clustering method with scRNA-seq and CITE-seq data☆10Jun 22, 2021Updated 4 years ago
- Paired-seq☆15Jul 17, 2024Updated last year
- ☆13Jan 24, 2024Updated 2 years ago
- Tools used in Human Cell Landscape(HCL)☆56Jul 30, 2020Updated 5 years ago
- dandelion - A single cell BCR/TCR V(D)J-seq analysis package☆124Updated this week
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆27Jun 5, 2018Updated 7 years ago
- ☆12Apr 16, 2021Updated 4 years ago
- Kinship In Mixed Model Analysis of RNA-seq☆15Apr 14, 2025Updated 10 months ago
- TRUST4 manuscript evaluation☆16Jul 8, 2022Updated 3 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets