Alternatives and similar repositories for RNAseqStat2:

Users that are interested in RNAseqStat2 are comparing it to the libraries listed below

• lijxug / CSOmapR
  R package of CSOmap(developing
  ☆14Updated 2 years ago
• ChongJenniferZhang / CLCA_WGS
  ☆24Updated last year
• CICAMS-Liu-lab / ECGEA
  ☆17Updated 4 years ago
• UMCUGenetics / primary-met-wgs-comparison
  Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.
  ☆15Updated last year
• Asa12138 / MetaNet
  Network analysis for multi-omics
  ☆13Updated last month
• bsml320 / scGWAS
  A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …
  ☆24Updated 2 years ago
• maese005 / oncoPredict
  ☆9Updated last year
• YutingPKU / Bulk_RNA-Seq_Workflow_Snakemake
  STAR, cufflinks, cluster, DESeq2, GO analysis
  ☆14Updated 4 years ago
• zgyaru / anti-PD1_ESCC
  ☆16Updated last year
• shengxin321 / HumanKidney_eQTL_and_snATAC-seq
  codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data
  ☆19Updated 4 years ago
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆12Updated 2 years ago
• omicsCore / scTyper
  scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data
  ☆28Updated 2 years ago
• franklinhuanglab / scRNA-seq-Analysis-of-Prostate-Cancer-Samples
  Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…
  ☆19Updated 2 years ago
• Changwuuu / Cuproptosis-pancancer
  ☆18Updated last year
• Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel
  ☆15Updated 2 years ago
• horsedayday / eQTLsingle
  ☆14Updated last year
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆23Updated last year
• jbryois / scRNA_disease
  Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1
  ☆18Updated 4 years ago
• bioinfo-biols / Code_for_circSC
  Analysis pipeline for our circSC manuscript
  ☆12Updated 2 years ago
• navinlabcode / ACT_paper
  Scripts used for the ACT paper
  ☆12Updated 3 years ago
• Morriseylab / scExtras
  ☆12Updated 7 months ago
• dengchunyu / scPagwas
  Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data
  ☆17Updated 2 months ago
• quadbio / RNAseq_tutorial
  ☆22Updated 4 months ago
• Henikoff / scCUT-Tag
  ☆15Updated last year
• yunshun / HumanBreast10X
  ☆24Updated 3 years ago
• shijianasdf / UsualRcode
  bioinformatics R test code
  ☆13Updated 2 years ago
• ventolab / HECA-Human-Endometrial-Cell-Atlas
  Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.
  ☆24Updated 8 months ago
• miccec / yaGST
  ☆13Updated 7 years ago
• wenweixiong / MARVEL
  ☆45Updated 6 months ago
• reedliu / scRNA-codes
  ☆17Updated 5 years ago