Alternatives and similar repositories for RNAseqStat2:

Users that are interested in RNAseqStat2 are comparing it to the libraries listed below

• CICAMS-Liu-lab / ECGEA
  ☆17Updated 3 years ago
• zgyaru / anti-PD1_ESCC
  ☆15Updated last year
• Asa12138 / MetaNet
  Network analysis for multi-omics
  ☆13Updated 2 weeks ago
• franklinhuanglab / scRNA-seq-Analysis-of-Prostate-Cancer-Samples
  Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…
  ☆19Updated 2 years ago
• ChongJenniferZhang / CLCA_WGS
  ☆24Updated last year
• horsedayday / eQTLsingle
  ☆14Updated last year
• ventolab / HECA-Human-Endometrial-Cell-Atlas
  Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.
  ☆23Updated 6 months ago
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆11Updated last year
• chensujun / scRNA
  ☆30Updated 3 years ago
• lijxug / CSOmapR
  R package of CSOmap(developing
  ☆14Updated 2 years ago
• quadbio / RNAseq_tutorial
  ☆18Updated 3 months ago
• dengchunyu / scPagwas
  Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data
  ☆16Updated last month
• bsml320 / scGWAS
  A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …
  ☆24Updated 2 years ago
• yunshun / HumanBreast10X
  ☆24Updated 2 years ago
• YutingPKU / Bulk_RNA-Seq_Workflow_Snakemake
  STAR, cufflinks, cluster, DESeq2, GO analysis
  ☆14Updated 4 years ago
• DongqiangZeng0808 / TMEscore
  Calculating Tumor microenvironment score
  ☆28Updated last year
• dengchunyu / TIP
  The source code of web server TIP, including example data.
  ☆18Updated 5 years ago
• molgenis / scRNA-seq
  ☆18Updated 10 months ago
• jmzeng1314 / BPscRNAseq
  ☆11Updated 6 years ago
• Teichlab / PanGIAtlas
  Integration of gut cell atlases
  ☆15Updated last month
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆14Updated 5 months ago
• PaulingLiu / metaICB
  ☆22Updated last year
• UMCUGenetics / primary-met-wgs-comparison
  Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.
  ☆15Updated last year
• miccec / yaGST
  ☆13Updated 7 years ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 2 years ago
• omicsCore / scTyper
  scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data
  ☆28Updated 2 years ago
• Changwuuu / Cuproptosis-pancancer
  ☆18Updated last year
• shengxin321 / HumanKidney_eQTL_and_snATAC-seq
  codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data
  ☆19Updated 4 years ago
• YuLab-SMU / tigeR
  🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
  ☆29Updated 6 months ago
• ManchesterBioinference / IntegratingATAC-RNA-HiC
  scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper
  ☆23Updated 2 years ago