KailiWang1 / RLBindLinks
a deep learning architecture for RNA-ligand binding sites prediction
☆18Updated last year
Alternatives and similar repositories for RLBind
Users that are interested in RLBind are comparing it to the libraries listed below
Sorting:
- ☆52Updated last year
- ☆77Updated last year
- Interpretable AI pipeline improving binding predictions for novel protein targets and ligands☆40Updated last year
- ☆62Updated 2 years ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆63Updated 6 months ago
- Antibody-specific masked language model☆62Updated 2 years ago
- ☆72Updated 5 years ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆32Updated 2 years ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- ☆86Updated 3 years ago
- A Python 3 version of the protein descriptor package propy☆46Updated 2 years ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆38Updated last month
- ☆34Updated last year
- GCN implementation for RNA-small molecule binding prediction. (https://academic.oup.com/nar/article/48/14/7690/5870337)☆16Updated last year
- Official implementation for ActFound (Nature Machine Intelligence): A bioactivity foundation model using pairwise meta-learning☆43Updated 11 months ago
- Transformer Based Language Model for Peptide Property Prediction☆47Updated last year
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- An analysis of a new experimentally-derived nucleic acid binding chemical library☆24Updated 2 years ago
- ☆35Updated 2 years ago
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆26Updated last year
- ☆53Updated last year
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- ☆49Updated 3 weeks ago
- Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted cont…☆75Updated 3 years ago
- ☆37Updated 11 months ago
- ☆44Updated 4 months ago
- DeepAAI☆35Updated 9 months ago
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆52Updated 10 months ago