tianlt / deepdirectLinks
☆17Updated last year
Alternatives and similar repositories for deepdirect
Users that are interested in deepdirect are comparing it to the libraries listed below
Sorting:
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆22Updated 8 months ago
- ☆29Updated 9 months ago
- ☆27Updated last month
- ☆23Updated 5 months ago
- An accurate and efficient protein sequence design approach☆25Updated 8 months ago
- ☆26Updated 2 months ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- ☆15Updated 7 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated 2 weeks ago
- Some scripts that I keep using over and over.☆20Updated 4 months ago
- ☆15Updated last year
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆18Updated 3 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆28Updated last year
- ☆39Updated last year
- Scoring methods for predicting the DDG upon protein mutation☆16Updated 2 years ago
- ☆25Updated 3 months ago
- ☆21Updated last year
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Updated 2 years ago
- Code for deep learning guided design of dynamic proteins☆31Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆42Updated 6 months ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 4 years ago
- Repo of AntiBMPNN project for antibody sequence design.☆20Updated 5 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- ☆29Updated last month
- bakerlab pymol scripts☆25Updated 5 years ago
- Machine learning prediction of enzyme optimum pH☆47Updated 6 months ago
- Making Protein folding accessible to all!☆24Updated last year
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆13Updated last year
- ☆36Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Updated 2 years ago