oxpig / CaLMLinks
Protein language model trained on coding DNA
☆53Updated last year
Alternatives and similar repositories for CaLM
Users that are interested in CaLM are comparing it to the libraries listed below
Sorting:
- ☆76Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆114Updated 5 months ago
- PLM based active learning model for protein engineering☆84Updated last year
- Geometric deep learning of protein–DNA binding specificity☆76Updated 10 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆85Updated 11 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆106Updated 2 weeks ago
- Learning the language of protein-protein interactions☆120Updated last week
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆88Updated last year
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Code repository of "Deep generative design of RNA family sequences"☆40Updated 2 months ago
- ☆36Updated last year
- RNA Multiple Sequence Alignment☆47Updated 2 years ago
- Efficient implementatin of ESM family.☆78Updated 4 months ago
- ☆77Updated last year
- ☆121Updated last year
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- Biological prediction models made simple.☆48Updated last week
- ☆92Updated last year
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆69Updated 5 months ago
- ☆47Updated last year
- ☆109Updated 2 years ago
- ☆52Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆48Updated 5 months ago
- ☆55Updated 5 months ago
- The code used to generate the results from Parkinson / Hard et al. 2022☆17Updated 6 months ago
- ☆74Updated 4 years ago
- ColabFold protocol☆56Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated last month
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆61Updated this week