Alternatives and similar repositories for PLMGraph-Inter

Users that are interested in PLMGraph-Inter are comparing it to the libraries listed below

• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆61Updated 2 years ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆33Updated last year
• Merck / BioPhi-2021-publication
  This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication
  ☆17Updated 2 years ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆47Updated 6 months ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆33Updated 2 years ago
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆25Updated 8 months ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆25Updated 2 years ago
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• dtischer / trdesign-motif
  Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…
  ☆16Updated 4 years ago
• Furman-Lab / PatchMAN
  ☆27Updated last month
• CarbonMatrixLab / immunefold
  Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning
  ☆22Updated 8 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆37Updated last month
• xuebingwu / ESM-Scan
  Complete saturation mutagenesis of a protein using ESM
  ☆14Updated last year
• AbSciBio / igdesign
  ☆47Updated 10 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆31Updated last year
• debbiemarkslab / nanobody-polyreactivity
  Polyreactivity Website
  ☆16Updated 2 years ago
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆31Updated last year
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆42Updated 5 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆29Updated last year
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• strauchlab / iNNterfaceDesign
  ☆20Updated 3 years ago
• gwlilabmit / FragFold
  Fragment binding prediction with ColabFold
  ☆37Updated last week
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆34Updated 2 years ago
• PKUliujl / GeoSeqBuilder
  ☆29Updated 9 months ago
• TobiasHeOl / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆21Updated 8 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆70Updated 3 weeks ago
• cl666666 / GVP-MSA
  ☆13Updated 2 years ago
• LLNL / CRPCA
  Computationally Restoring the Potency of a Clinical Antibody
  ☆18Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆54Updated 3 months ago
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆27Updated 8 months ago