[NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models
☆65Aug 2, 2024Updated 2 years ago
Alternatives and similar repositories for RNABenchmark
Users that are interested in RNABenchmark are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [NeurIPS 2024] Model Decides How to Tokenize: Adaptive DNA Sequence Tokenization with MxDNA☆23Apr 2, 2025Updated last year
- RNAGenesis: A Generalist Foundation Model for Functional RNA Therapeutics☆33Jun 28, 2026Updated 2 months ago
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated 2 years ago
- (IROS 2025) RRT*former: Environment-Aware Sampling-Based Motion Planning using Transformer☆16Feb 28, 2025Updated last year
- RiboNucleic Acid (RNA) Language Model☆173May 4, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Provide RNA and DNA Foundation Model Benchmarks and Applications☆29Nov 26, 2025Updated 9 months ago
- HydraRNA is a full-length RNA language model.☆18Dec 15, 2025Updated 8 months ago
- structRFM: A fully open structure-guided RNA foundation model for robust structural and functional inference☆40Updated this week
- A Foundation Language Model For Multilayer Regulation of RNA☆22Nov 30, 2025Updated 9 months ago
- Nature Methods: RNA foundation model (together with RhoFold)☆390May 27, 2025Updated last year
- RNAGym is an extensive benchmark suite and resource for RNA fitness and structure prediction☆43Updated this week
- GB.ModelGenerator is a software stack that enables researchers to adapt pretrained models and generate finetuned models for downstream ta…☆125Aug 19, 2026Updated 2 weeks ago
- A fast and accurate RNA secondary structure, end-to-end approach prediction method.☆13Jan 2, 2025Updated last year
- ☆27Jun 5, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆17Jun 22, 2024Updated 2 years ago
- Code repository for study ''Evaluating the representational power of pre-trained DNA language models for regulatory genomics"☆26Jun 26, 2024Updated 2 years ago
- Repository for mRNA Paper and CodonBERT publication.☆146May 19, 2026Updated 3 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆70May 8, 2026Updated 3 months ago
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆129Dec 10, 2025Updated 8 months ago
- Collection of mRNA benchmarks☆53Aug 26, 2026Updated last week
- Official implementation of From Supervision to Exploration: What Does Protein Language Model Learn During Reinforcement Learning?☆15Jun 19, 2026Updated 2 months ago
- ☆20Oct 18, 2024Updated last year
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆246May 29, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆96Oct 9, 2024Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆71Jun 16, 2026Updated 2 months ago
- ☆19Mar 30, 2025Updated last year
- A family of codon-resolution language models trained on 130 million protein-coding sequences from over 20,000 species.☆90Nov 1, 2025Updated 10 months ago
- BPfold: Deep generalizable prediction of RNA secondary structure via base pair motif energy.☆35May 27, 2026Updated 3 months ago
- [ICML 2025] Fast and Low-Cost Genomic Foundation Models via Outlier Removal.☆19Jun 19, 2025Updated last year
- Controllable Protein Sequence Generation with LLM Preference Optimization, AAAI 2025☆18Mar 10, 2025Updated last year
- EpiGePT: a pretrained transformer-based language model for context-specific human epigenomics☆34Jun 22, 2025Updated last year
- ☆52Mar 22, 2026Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- RiboNN: predicting translation efficiencies from mRNA sequences☆65Jan 12, 2026Updated 7 months ago
- ☆26May 19, 2024Updated 2 years ago
- Code associated with the publication 'Generative and predictive neural networks for the design of functional RNA molecules'☆15Apr 8, 2025Updated last year
- ☆23Mar 15, 2024Updated 2 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆15Mar 14, 2024Updated 2 years ago
- A Generative Multimodal Model for Biomolecules☆43Aug 12, 2026Updated 3 weeks ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆160Jul 20, 2026Updated last month