Alternatives and similar repositories for ERNIE-RNA

Users that are interested in ERNIE-RNA are comparing it to the libraries listed below

• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆63Updated last year
• westlake-repl / ESM-Ezy
  ☆25Updated 2 months ago
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆105Updated 4 months ago
• ai4protein / VenusFactory
  🏭 Easy data acquisition, benchmark resources, PLM fine-tuning for bio-researchers. (ACL Demo 2025)
  ☆97Updated this week
• ai4protein / ProSST
  🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)
  ☆129Updated last month
• Luo-SynBioLab / UniKP
  ☆75Updated last year
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆62Updated 5 months ago
• varun-shanker / structural-evolution
  ☆109Updated last year
• zchwang / CataPro
  A generalized enzyme kinetics parameter prediction model.
  ☆53Updated last week
• CSUBioGroup / DPFunc
  ☆45Updated last month
• bio-ontology-research-group / deepgo2
  ☆44Updated 10 months ago
• timkartar / DeepPBS
  Geometric deep learning of protein–DNA binding specificity
  ☆76Updated 3 months ago
• AlexanderKroll / ESP
  ☆73Updated 10 months ago
• RSchmirler / data-repo_plm-finetune-eval
  Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"
  ☆42Updated 10 months ago
• zhanghaicang / carbonmatrix_public
  ☆115Updated last month
• westlake-repl / SaprotHub
  Making Protein Modeling Accessible to All Biologists
  ☆114Updated this week
• duolinwang / S-PLM
  S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure
  ☆67Updated 3 weeks ago
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆80Updated last month
• yikunpku / RNA-MSM
  Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…
  ☆63Updated 11 months ago
• kundajelab / ImmuneCLIP
  CLIP-based model for aligning epitopes to immune receptors
  ☆11Updated 2 months ago
• ai4protein / Pro-FSFP
  Pro-FSFP: Few-Shot Protein Fitness Prediction
  ☆89Updated 2 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆72Updated 6 months ago
• westlake-repl / ProTrek
  ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
  ☆113Updated this week
• jkwang93 / AMP-Designer
  A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery
  ☆36Updated 2 months ago
• sokrypton / RFdiffusion
  Code for running RFdiffusion
  ☆12Updated 3 months ago
• maranasgroup / CatPred
  Machine Learning models for in vitro enzyme kinetic parameter prediction
  ☆50Updated 3 months ago
• SysBioChalmers / DLKcat
  Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic mo…
  ☆165Updated 2 years ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆66Updated 3 years ago
• ai4protein / Pro-Prime
  ☆68Updated last month
• CatIIIIIIII / RNAErnie
  Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"
  ☆48Updated 9 months ago