Alternatives and similar repositories for RNAView

Users that are interested in RNAView are comparing it to the libraries listed below

• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated last year
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆50Updated this week
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated last month
• PDB-REDO / libcifpp
  Library containing code to manipulate mmCIF and PDB files
  ☆35Updated this week
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆97Updated 9 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆54Updated last month
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated last year
• lightdock / lightdock-rust
  A Rust implementation of the LightDock macromolecular docking software
  ☆28Updated last year
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆52Updated 4 months ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 5 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆66Updated 8 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆40Updated 5 months ago
• proteinphysiologylab / frustratometeR
  ☆36Updated 7 months ago
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆73Updated 5 months ago
• ShintaroMinami / PyDSSP
  A simplified implementation of DSSP algorithm for PyTorch and NumPy
  ☆84Updated 2 months ago
• bene837 / af2seq
  ☆43Updated 8 months ago
• ncbi / SSDraw
  ☆85Updated last year
• srnas / barnaba
  Analyse Nucleic Acids Structure and Simulations with baRNAba
  ☆42Updated last year
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆84Updated last year
• AlexanderKroll / KM_prediction_function
  ☆20Updated 2 years ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆42Updated last year
• JudeWells / chainsaw
  ☆38Updated 7 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆38Updated 2 weeks ago
• DunbrackLab / IPSAE
  Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
  ☆52Updated last month
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆63Updated last month
• greener-group / progres
  Fast protein structure searching or your money back
  ☆102Updated last month
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆44Updated 4 months ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 2 years ago
• cmbi / dssp
  The DSSP building software
  ☆43Updated last year
• akiyamalab / MEGADOCK
  An ultra-high-performance protein-protein docking for heterogeneous supercomputers
  ☆62Updated last year