☆76Oct 19, 2024Updated last year
Alternatives and similar repositories for megaDNA
Users that are interested in megaDNA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Detection of phage RBPs based on protein domains and machine learning☆32Feb 5, 2025Updated last year
- Viral protein family functional prediction using protein language models☆23Jan 6, 2026Updated 3 months ago
- ☆52Aug 19, 2024Updated last year
- ☆35Dec 20, 2023Updated 2 years ago
- Systematic search of all known anti-phage systems.☆151Apr 2, 2026Updated last week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Repository for codes, analyses and visualizations for the CAMI II challenges☆14Sep 4, 2023Updated 2 years ago
- Phage Annotation using Protein Structures☆156Feb 9, 2026Updated 2 months ago
- Ensemble binning strategies for combining the output of multiple binning methods.☆22Mar 11, 2023Updated 3 years ago
- Biological foundation modeling from molecular to genome scale☆1,494Mar 20, 2026Updated 2 weeks ago
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆14Feb 10, 2022Updated 4 years ago
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆60Oct 8, 2024Updated last year
- ☆11Jun 3, 2025Updated 10 months ago
- The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.☆358Mar 18, 2026Updated 3 weeks ago
- Python package to run DefensePredictor, a model that identifies proteins involved in anti-phage defense☆29Dec 17, 2025Updated 3 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- ☆17Mar 13, 2026Updated 3 weeks ago
- ☆32Mar 3, 2024Updated 2 years ago
- ☆20Oct 18, 2024Updated last year
- ☆11Aug 2, 2024Updated last year
- FuncFetch workflow scripts☆15Jun 9, 2025Updated 10 months ago
- The viral taxonomic assignment pipeline☆43Feb 5, 2026Updated 2 months ago
- ViralCC: leveraging metagenomic proximity-ligation to retrieve complete viral genomes☆18Feb 3, 2026Updated 2 months ago
- RiboNucleic Acid (RNA) Language Model☆159Oct 3, 2025Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆18Jun 22, 2024Updated last year
- Bact-Builder: Microbial de novo genome assembly pipeline☆13Dec 5, 2022Updated 3 years ago
- ☆17Sep 10, 2024Updated last year
- Accurate identification of bacteriophages from metagenomic data using Transformer☆22Nov 6, 2024Updated last year
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆27Jul 15, 2025Updated 8 months ago
- CATH: high-throughput protein structure/function annotations☆12Dec 17, 2019Updated 6 years ago
- Pairwise machine learning models for phage-host interaction prediction☆21Jun 23, 2024Updated last year
- Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena☆774Apr 22, 2025Updated 11 months ago
- Pretraining infrastructure for multi-hybrid AI model architectures☆222Feb 20, 2026Updated last month
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Genomic Pre-trained Network☆336Mar 25, 2026Updated 2 weeks ago
- Ready-to-use pipeline to detect, count and identify the hgcAB genes, involved in mercury methylation, from metagenomes☆10May 17, 2024Updated last year
- Benchmarking Pipeline for Prediction of Protein-Protein Interactions☆14Feb 7, 2022Updated 4 years ago
- structRFM: A fully open structure-guided RNA foundation model for robust structural and functional inference☆33Jan 25, 2026Updated 2 months ago
- Bilingual Language Model for Protein Sequence and Structure☆308Mar 6, 2026Updated last month
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆469Jan 1, 2026Updated 3 months ago
- Inference and numerics for multi-hybrid AI model architectures☆100Mar 3, 2026Updated last month