Multi-genome synteny block visualization tool
☆67Oct 13, 2026Updated 2 weeks ago
Alternatives and similar repositories for ntSynt-viz
Users that are interested in ntSynt-viz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Detecting multi-genome synteny using minimizer graph mapping☆117Sep 28, 2026Updated last month
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 3 years ago
- Mabs, a genome assembly tool that optimizes parameters of Hifiasm and Flye☆38Apr 20, 2026Updated 6 months ago
- This is the standalone version of the EviAnn pipeline☆187Oct 7, 2026Updated 3 weeks ago
- ☆12Jun 12, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Improved long-read assembly by preserving contained reads☆29Aug 22, 2024Updated 2 years ago
- Mosaic Genome Assembler☆28Sep 14, 2026Updated last month
- A program for assessing the T2T genome continuity and completeness☆98Oct 13, 2026Updated 2 weeks ago
- dot plotter on top of minimap2☆17Oct 4, 2026Updated 3 weeks ago
- CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…☆18Jan 24, 2026Updated 9 months ago
- a gap-filling tools of genome in complex region.☆27Dec 30, 2025Updated 10 months ago
- blastn2dotplots: multiple dot-plot visualizer☆29Sep 15, 2025Updated last year
- Consensus genome annotation using OMA☆32Jan 14, 2026Updated 9 months ago
- Correcting errors in noisy long reads using variation graphs☆53Nov 17, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 8 months ago
- Tool to plot synteny and structural rearrangements between genomes☆359Jul 27, 2026Updated 3 months ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆63Jul 5, 2026Updated 3 months ago
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- ☆10Sep 4, 2024Updated 2 years ago
- ☆167Apr 13, 2026Updated 6 months ago
- oxford dot plots☆178Sep 20, 2026Updated last month
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆13Nov 6, 2025Updated 11 months ago
- A genome completeness evaluation tool based on miniprot☆270Oct 7, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆205Oct 5, 2026Updated 3 weeks ago
- Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).☆119Jul 23, 2024Updated 2 years ago
- FastOMA is a scalable software package to infer orthology relationship.☆104Updated this week
- RepeatIdentifier☆76Mar 19, 2025Updated last year
- Whole Genome Alignment Tools☆223Nov 6, 2025Updated 11 months ago
- Any Way to Show Multi genomic Synteny☆232Oct 14, 2026Updated 2 weeks ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆99Dec 3, 2025Updated 10 months ago
- Yet another Hi-C scaffolding tool☆185Nov 4, 2024Updated last year
- Synteny and Rearrangement Identifier☆496Jul 1, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated last year
- A chromosome-level polyploid phasing scaffolding tool☆29Oct 19, 2026Updated last week
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆132Updated this week
- 🪡Correct and scaffold assemblies using long reads☆62Apr 1, 2026Updated 6 months ago
- The Arabidopsis pancentromere evolves through rapid cycles of satellite homogenization and centrophilic ATHILA retrotransposon invasion☆10Apr 29, 2023Updated 3 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆58Oct 5, 2026Updated 3 weeks ago
- Rapid alignment-free method for introgression screening and GWAS using k-mer profiles☆32Apr 22, 2026Updated 6 months ago