BioinformaticsToolsmith / MeShClustLinks
MeShClust: an intelligent tool for clustering DNA sequences
☆39Updated 4 years ago
Alternatives and similar repositories for MeShClust
Users that are interested in MeShClust are comparing it to the libraries listed below
Sorting:
- GenMap - Fast and Exact Computation of Genome Mappability☆113Updated last year
- Variant calling tool for long-read sequencing data☆117Updated 10 months ago
- A fork of exonerate: a generic tool for sequence alignment☆71Updated 2 years ago
- Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…☆97Updated 8 months ago
- A versatile toolkit for k-mers with taxonomic information☆82Updated 5 months ago
- Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing☆60Updated last year
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆110Updated 2 weeks ago
- PHAST☆80Updated this week
- A tool to identify, orient, trim and rescue full length cDNA reads☆84Updated 3 years ago
- Dotplot large Genomes in an Interactive, Efficient and Simple way☆113Updated 2 weeks ago
- Python programs for processing GFF3 files☆102Updated last month
- GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/n…☆70Updated 3 years ago
- Error correction for Illumina RNA-seq reads☆67Updated last month
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 4 years ago
- A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment☆87Updated 4 years ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 5 years ago
- ☆34Updated 2 years ago
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆67Updated 2 years ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆106Updated last week
- Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to s…☆108Updated last week
- Assembled Genomes Compressor☆178Updated last year
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆60Updated 2 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆68Updated 9 months ago
- Materials for Spring 2021 Applied Genomics Course☆53Updated 4 years ago
- ☆68Updated this week
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆35Updated last year
- ☆48Updated last month
- ☆49Updated last year
- Hybrid error correction of long reads using colored de Bruijn graphs☆107Updated 3 weeks ago
- A local-haplotagging-based small and structural variant caller☆94Updated 3 weeks ago