Pandaman-Ryan / AgentBind
☆12Updated 2 weeks ago
Related projects: ⓘ
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆16Updated 3 years ago
- BPNet manuscript code.☆11Updated 3 years ago
- Code for paper "Principled feature attribution for unsupervised gene expression analysis"☆10Updated last year
- ☆11Updated 4 years ago
- Code for reproducing the Sei manuscript results☆15Updated 2 years ago
- Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.☆23Updated 2 years ago
- ☆10Updated 2 years ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆12Updated last year
- Saluki, a method to predict mRNA half-lives from sequence☆18Updated last year
- epigenome analysis to rank transcription factors☆13Updated 4 years ago
- ☆13Updated 2 months ago
- ☆12Updated 3 years ago
- ☆10Updated 3 years ago
- Kdrew's scripts for handling protein complex map data☆12Updated 9 months ago
- ☆15Updated 3 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆38Updated 2 years ago
- In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…☆14Updated 4 years ago
- Code associated with MIX-seq manuscript☆14Updated 4 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated last year
- Summary statistics for repertoires☆16Updated last year
- Multi-study integration of cellular trajectories☆18Updated 4 years ago
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆26Updated last month
- Gene Expression Decomposition and Integration☆14Updated last month
- single-cell Nucleosome Methylation Transcription☆13Updated 6 years ago
- ☆12Updated 2 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆22Updated last month
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆12Updated 4 years ago
- ☆22Updated 6 months ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 3 years ago
- ☆11Updated 3 years ago