Alternatives and similar repositories for AgentBind:

Users that are interested in AgentBind are comparing it to the libraries listed below

• kundajelab / bpnet-manuscript
  BPNet manuscript code.
  ☆11Updated 4 years ago
• rschwess / tutorial_dl_for_genomics
  A short tutorial to using DL and keras for genomics with sequence data.
  ☆15Updated 4 years ago
• splicebox / MntJULiP
  Comprehensive and scalable differential splicing analyses
  ☆14Updated this week
• rpmccordlab / SMILE
  SMILE: Mutual Information Learning for Integration of Single Cell Omics Data
  ☆11Updated last year
• songlab-cal / scquint
  ☆16Updated 8 months ago
• vagarwal87 / saluki_paper
  Saluki, a method to predict mRNA half-lives from sequence
  ☆22Updated 2 years ago
• marcottelab / protein_complex_maps
  Kdrew's scripts for handling protein complex map data
  ☆14Updated last year
• epigen / scifiRNA-seq
  ☆12Updated 4 years ago
• FunctionLab / sei-manuscript
  Code for reproducing the Sei manuscript results
  ☆16Updated 3 years ago
• veltenlab / mitoClone
  ☆12Updated 3 years ago
• suinleelab / PAUSE
  Code for paper "Principled feature attribution for unsupervised gene expression analysis"
  ☆11Updated last year
• fenglin0 / benchmarking_variant_callers
  In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…
  ☆15Updated 5 years ago
• ma-compbio / CTCF-MP
  ☆11Updated 4 years ago
• wangjuan001 / hicplus
  ☆10Updated 3 years ago
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆20Updated 10 months ago
• canzarlab / McSplicer
  ☆11Updated 2 years ago
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆39Updated 2 years ago
• FunctionLab / DeepArk
  Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning
  ☆17Updated 3 years ago
• chensong611 / SNARE_prep
  dropseq-based single nuclei genomic accessibility and RNA expression (SNARE-seq) preprocessing pipeline
  ☆9Updated 5 years ago
• dbrg77 / ISSAAC-seq
  ☆16Updated last year
• Acribbs / TallyNN
  single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)
  ☆13Updated last year
• zhongzhd / ont_m6a_detection
  ☆10Updated 5 months ago
• liulab-dfci / lisa
  epigenome analysis to rank transcription factors
  ☆13Updated 5 years ago
• CostaLab / MOJITOO
  MOJITOO: a fast and universal method for integration of multimodal single cell data
  ☆10Updated 3 months ago
• klarman-cell-observatory / perturbseq
  Perturb-seq analysis package
  ☆14Updated 9 months ago
• kuijjerlab / PySNAIL
  Smooth-quantile Normalization Adaptation for Inference of co-expression Links
  ☆16Updated last year
• ma-compbio / scGHOST
  single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, genome subcompartment
  ☆20Updated 10 months ago
• timplab / nanoNOMe
  nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis
  ☆18Updated 2 years ago
• liulab-dfci / TRUST4_manuscript_evaluation
  TRUST4 manuscript evaluation
  ☆14Updated 2 years ago
• ay-lab / ExTraMapper
  ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequenc…
  ☆10Updated 2 years ago