Pandaman-Ryan / AgentBindLinks
☆13Updated 9 months ago
Alternatives and similar repositories for AgentBind
Users that are interested in AgentBind are comparing it to the libraries listed below
Sorting:
- A short tutorial to using DL and keras for genomics with sequence data.☆15Updated 4 years ago
- Code for paper "Principled feature attribution for unsupervised gene expression analysis"☆11Updated 2 years ago
- Code for reproducing the Sei manuscript results☆17Updated 3 years ago
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Updated 4 years ago
- BPNet manuscript code.☆12Updated 4 years ago
- In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…☆15Updated 5 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆24Updated 2 years ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Updated 2 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆24Updated 9 months ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- ☆11Updated 3 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- Comprehensive Human Expressed SequenceS☆17Updated 10 months ago
- Code associated with MIX-seq manuscript☆15Updated 4 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 3 years ago
- ☆10Updated 3 years ago
- Comprehensive and scalable differential splicing analyses☆17Updated 2 months ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆21Updated 2 years ago
- Pipeline for generating reference and perturbed sequences for input into predictive models.☆11Updated 6 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆16Updated last week
- Analysis of snRNA-seq2 data coming from 3 months old mouse liver, dissecting the influence ploidy has on gene expression.☆12Updated 3 years ago
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆14Updated 6 months ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆12Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- Chromatin interaction aware gene regulatory modeling with graph attention networks☆26Updated 2 years ago
- Genomic sequence preprocessing toolkit☆12Updated last week