Alternatives and similar repositories for MeShClust2

Users that are interested in MeShClust2 are comparing it to the libraries listed below

• thekaplanlab / msabrowser
  🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
  ☆32Updated last year
• KevinKuchinski / ProbeTools
  Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa
  ☆24Updated 2 years ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆30Updated 3 months ago
• bioforensics / pytaxonkit
  Python bindings for the TaxonKit library
  ☆41Updated last month
• Benson-Genomics-Lab / IRF
  Inverted Repeats Finder: a program to analyze DNA and RNA sequences
  ☆18Updated 4 months ago
• ProwlerForNanopore / ProwlerTrimmer
  Trimming tool for Oxford Nanopore sequence data
  ☆21Updated 4 years ago
• kamimrcht / CARNAC-LR
  ☆15Updated 5 years ago
• TimoLassmann / samstat
  SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.
  ☆24Updated last year
• SushiLab / mVIRs
  ☆13Updated last year
• iqbal-lab-org / BIGSI
  BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data
  ☆10Updated 2 years ago
• signalbash / borf
  ORF prediction using python
  ☆11Updated 3 years ago
• mathjeff / Mapper
  Genomic sequence aligner
  ☆25Updated last month
• Gabaldonlab / EvolClust
  Evolcust retrieves groups of genes that appear clustered together in groups of species
  ☆16Updated 2 years ago
• dvdylus / read2tree
  ☆20Updated 3 years ago
• rrwick / Catpac
  a Contig Alignment Tool for Pairwise Assembly Comparison
  ☆13Updated 5 years ago
• DrMicrobit / mira
  MIRA sequence assembler
  ☆29Updated 5 months ago
• linsalrob / genbank_to
  Convert genbank files to a swath of other formats
  ☆18Updated last year
• liaoherui / VirStrain
  An RNA virus strain-level identification tool for short reads.
  ☆21Updated last year
• nf-core / kmermaid
  k-mer similarity analysis pipeline
  ☆21Updated 3 weeks ago
• willem-stock / CONCOMPRA
  consensus approach for community profiling with nanopore amplicon sequencing data
  ☆14Updated 8 months ago
• BolognaBiocomp / deepsig
  DeepSig - Predictor of signal peptides in proteins based on deep learning
  ☆26Updated 2 years ago
• cpockrandt / PhyloCSFpp
  PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…
  ☆31Updated 3 years ago
• martin-steinegger / kraken-protocol
  Metagenome analysis using the Kraken software suite
  ☆32Updated 2 years ago
• raphael-upmc / proteinClusteringPipeline
  a pipeline to cluster proteins into families
  ☆10Updated 5 years ago
• peterk87 / nf-flu
  Influenza genome analysis Nextflow workflow
  ☆26Updated 2 months ago
• pantherdb / TreeGrafter
  TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.
  ☆11Updated 4 years ago
• AGIScuipeng / PMPrimer
  Automatically design multiplex PCR primer pairs for diverse templates
  ☆28Updated last year
• brianli314 / palindrome-finder
  A bioinformatics tool written in Rust to find palindromic sequences in DNA
  ☆35Updated 4 months ago
• Finn-Lab / SanntiS
  SMBGC Annotation using Neural Networks Trained on Interpro Signatures
  ☆27Updated 2 months ago
• davidemms / STRIDE
  STRIDE: Species Tree Root Inference from Gene Duplication Events
  ☆11Updated 6 years ago