GuanLab / FastClone_GuanLabLinks
☆15Updated 3 years ago
Alternatives and similar repositories for FastClone_GuanLab
Users that are interested in FastClone_GuanLab are comparing it to the libraries listed below
Sorting:
- ☆11Updated 2 years ago
- Spatial Computational Inference of MEtastatic Timing (SCIMET)☆14Updated 6 years ago
- DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell frac…☆21Updated last year
- Git repo for CONIPHER tree building☆21Updated 3 months ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated last year
- Analysis pipeline for our circSC manuscript☆13Updated 3 years ago
- Code used to generate the results in "Somatic chronology of treatment-resistant prostate cancer via deep whole-genome ctDNA sequencing"☆14Updated last year
- Codes and Data for FFPEsig manuscript☆17Updated last year
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆71Updated last year
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆20Updated 4 months ago
- ☆17Updated 6 years ago
- Scripts used for the ACT paper☆12Updated 4 years ago
- An R package to time somatic mutations☆62Updated 4 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Updated 5 years ago
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆34Updated 7 months ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 4 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- MutSig2CV from Lawrence et al. 2014☆31Updated 4 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Updated 3 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆29Updated 3 months ago
- Single Cell Analysis Automated Workflow☆27Updated 2 years ago
- Next-Gen Sequencing tools from the Horvath Lab☆44Updated last week
- Toolkit for single-cell copy number analysis☆23Updated last week
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆52Updated 3 years ago
- CHISEL -- Copy-number Haplotype Inference in Single-cell by Evolutionary Links☆40Updated 8 months ago
- hands-on for NGS/SNParray CNV call trainning☆17Updated 3 years ago
- Comprehensive genome-wide visualization of absolute copy number and copy neutral variations☆29Updated 6 years ago
- Code accompanying The Evolutionary history of 2,658 cancers☆46Updated 4 years ago
- ATAC-seq processing pipeline☆33Updated 3 years ago
- ☆17Updated 2 years ago