GuanLab / FastClone_GuanLabLinks
☆15Updated 4 years ago
Alternatives and similar repositories for FastClone_GuanLab
Users that are interested in FastClone_GuanLab are comparing it to the libraries listed below
Sorting:
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell frac…☆21Updated last year
- Dirichlet Process based methods for subclonal reconstruction of tumours☆30Updated 7 months ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 5 years ago
- An R package to time somatic mutations☆64Updated 4 years ago
- Next-Gen Sequencing tools from the Horvath Lab☆44Updated last month
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆35Updated 11 months ago
- Toolkit for single-cell copy number analysis☆24Updated 3 months ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- ☆17Updated 6 years ago
- ☆11Updated 2 years ago
- Comprehensive genome-wide visualization of absolute copy number and copy neutral variations☆29Updated 6 years ago
- ☆17Updated 2 years ago
- Spatial Computational Inference of MEtastatic Timing (SCIMET)☆14Updated 6 years ago
- Codes and Data for FFPEsig manuscript☆17Updated last year
- Scripts used for the ACT paper☆12Updated 4 years ago
- RNA editing tests☆17Updated 5 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Updated 5 years ago
- MutSig2CV from Lawrence et al. 2014☆33Updated 5 years ago
- ☆51Updated last year
- Git repo for CONIPHER tree building☆24Updated 7 months ago
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆21Updated 2 months ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 3 years ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)☆17Updated 4 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆71Updated last year
- Single Cell Analysis Automated Workflow☆28Updated 2 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated 2 years ago
- ☆12Updated last year
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago