This is the repository for SeCNV, a single cell copy number profiling tool.
☆12Dec 12, 2024Updated last year
Alternatives and similar repositories for SeCNV
Users that are interested in SeCNV are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16May 13, 2022Updated 3 years ago
- Single-cell copy number calling and event history reconstruction.☆28Dec 21, 2024Updated last year
- Simple ftrl implementation in R for the AVAZU CTR Competition in R☆13Jan 21, 2015Updated 11 years ago
- Toolkit for single-cell copy number analysis☆31Dec 15, 2025Updated 3 months ago
- Reproducible analyses for the NicheCompass manuscript☆13Jul 3, 2025Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆12Dec 6, 2023Updated 2 years ago
- python module for querying the vicc knowledgebase integration datastore☆11Jul 6, 2023Updated 2 years ago
- Kyoto Encylopedia of Genes and Genomes (KEGG) NetworkX Topological parser automates downloading, parsing, and converting from a KEGG Mark…☆11May 8, 2024Updated last year
- Quality control for phylogenetic analyses☆13Mar 16, 2026Updated 3 weeks ago
- a bioinformatics tool for simulating single-cell genome sequencing data☆10Dec 19, 2019Updated 6 years ago
- CHISEL -- Copy-number Haplotype Inference in Single-cell by Evolutionary Links☆43Nov 13, 2024Updated last year
- LeetCode题解（C/C++）☆25Aug 22, 2023Updated 2 years ago
- RNA mapping pipeline☆18Jun 3, 2018Updated 7 years ago
- The EnsembleVariantCallingPipeline takes files in FASTQ or BAM format and performs SNV and INDEL variant calling from 4 variant callers (…☆14Jul 24, 2025Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆17Apr 9, 2021Updated 5 years ago
- Mean Alterations Using Discrete Expression☆14Apr 9, 2024Updated 2 years ago
- Code used to generate the results in "Somatic chronology of treatment-resistant prostate cancer via deep whole-genome ctDNA sequencing"☆16Mar 11, 2024Updated 2 years ago
- Fast implementation of the Neighbour-Joining method for phylogenetic inference☆18Sep 10, 2024Updated last year
- 平时cf和洛谷做题的题解以及学习算法的笔记☆45Jul 25, 2022Updated 3 years ago
- ☆16Aug 11, 2021Updated 4 years ago
- Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata☆11Feb 27, 2026Updated last month
- code for box-covering algorithms☆20Sep 30, 2021Updated 4 years ago
- Scripts used for the ACT paper☆12May 6, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆33May 19, 2025Updated 10 months ago
- numerical derivative lib☆13Mar 18, 2014Updated 12 years ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆48Aug 18, 2025Updated 7 months ago
- Central repository for the VICC metakb web application☆15Updated this week
- Phylogenetic Network Inference without ILS☆19Jul 31, 2022Updated 3 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆15Apr 14, 2025Updated 11 months ago
- Lab webpage☆16Mar 30, 2026Updated last week
- A new graphical interface for RAxML☆23Updated this week
- This is the repository for DeepHost, a phage host prediction tool.☆21Dec 12, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Analyzing chromatin accessibility data in R☆18Jun 23, 2023Updated 2 years ago
- QBRC Somatic Mutation Calling Pipeline☆16Feb 8, 2022Updated 4 years ago
- ☆16Apr 10, 2024Updated 2 years ago
- R wrapper for utilizing the SigProfilerMatrixGenerator framework☆20Jan 29, 2026Updated 2 months ago
- ☆18May 12, 2023Updated 2 years ago
- ASTRAL for PaRalogs and Orthologs☆22Sep 13, 2022Updated 3 years ago
- Sample Metadata Curation for curatedMetagenomicData☆30Mar 26, 2026Updated 2 weeks ago